Evidence map›Paper›PMID 23381954›Full record

ArticleJournal of radiation research2013

Isolation of a novel UVB-tolerant rice mutant obtained by exposure to carbon-ion beams.

Nao Takano, Yuko Takahashi, Mitsuru Yamamoto, Mika Teranishi, Hiroko Yamaguchi, Ayako N Sakamoto, Yoshihiro Hase, Hiroko Fujisawa, Jianzhong Wu, Takashi Matsumoto and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of radiation research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Heat-KilledAntioxidants (Basel, Switzerland) · 2022
    Article
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Nao TakanoGraduate School of Life Sciences, Tohoku University, Sendai, 980-8577, Japan.
Yuko Takahashi
Mitsuru Yamamoto
Mika Teranishi
Hiroko Yamaguchi
Ayako N Sakamoto
Yoshihiro Hase
Hiroko Fujisawa
Jianzhong Wu
Takashi Matsumoto
Seiichi Toki
Jun Hidema
Tohoku University · JPInstitute of Agrobiological Sciences · JPJapan Atomic Energy Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

UVB radiation suppresses photosynthesis and protein biosynthesis in plants, which in turn decreases growth and productivity. Here, an ultraviolet-B (UVB)-tolerant rice mutant, utr319 (UV Tolerant Rice 319), was isolated from a mutagenized population derived from 2500 M1 seeds (of the UVB-resistant cultivar 'Sasanishiki') that were exposed to carbon ions. The utr319 mutant was more tolerant to UVB than the wild type. Neither the levels of UVB-induced cyclobutane pyrimidine dimers (CPDs) or (6-4) pyrimidine-pyrimidone photodimers [(6-4) photoproducts], nor the repair of CPDs or (6-4) photoproducts, was altered in the utr319 mutant. Thus, the utr319 mutant may be impaired in the production of a previously unidentified factor that confers UVB tolerance. To identify the mutated region in the utr319 mutant, microarray-based comparative genomic hybridization analysis was performed. Two adjacent genes on chromosome 7, Os07g0264900 and Os07g0265100, were predicted to represent the mutant allele. Sequence analysis of the chromosome region in utr319 revealed a deletion of 45 419 bp. RNAi analysis indicated that Os07g0265100 is most likely the mutated gene. Database analysis indicated that the Os07g0265100 gene, UTR319, encodes a putative protein with unknown characteristics or function. In addition, the homologs of UTR319 are conserved only among land plants. Therefore, utr319 is a novel UVB-tolerant rice mutant and UTR319 may be crucial for the determination of UVB sensitivity in rice, although the function of UTR319 has not yet been determined.

Indexed as

Heavy IonsMutationUltraviolet RaysAllelesAmino Acid SequenceCarbonChromosomesChromosomes, Artificial, BacterialComparative Genomic HybridizationDNA RepairGene LibraryMolecular Sequence DataOligonucleotide Array Sequence AnalysisOryzaPhenotypePhotosynthesisCarbonPyrimidine Dimerscarbon-ion beamrice mutantroot bending assayUVB-tolerance

Identifiers

PMID23381954
PMCPMC3709678
OpenAlexW2138170709

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.