Evidence map›Paper›PMID 23378916›Full record

ArticleScientific reports2013

Specificity and heterogeneity of terahertz radiation effect on gene expression in mouse mesenchymal stem cells.

Boian S Alexandrov, M Lisa Phipps, Ludmil B Alexandrov, Layla G Booshehri, Anna Erat, Janice Zabolotny, Charles H Mielke, Hou-Tong Chen, George Rodriguez, Kim Ø Rasmussen and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 100 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Transcriptomic Response of Cells of the Thermophilic BacteriumInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Examining DNA breathing with pyDNA-EPBD.Bioinformatics (Oxford, England) · 2023
    Article
  11. Article
  12. Article
  13. Specific Features of the Proteomic Response of Thermophilic BacteriumInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Cellular effects of terahertz waves.Journal of biomedical optics · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Boian S AlexandrovTheoretical Division, Los Alamos National Laboratory, Los Alamos, NM 87545, USA. boian@lanl.gov
M Lisa Phipps
Ludmil B Alexandrov
Layla G Booshehri
Anna Erat
Janice Zabolotny
Charles H Mielke
Hou-Tong Chen
George Rodriguez
Kim Ø Rasmussen
Jennifer S Martinez
Alan R Bishop
Anny Usheva
Los Alamos National Laboratory · USBeth Israel Deaconess Medical Center · USCenter for Integrated Nanotechnologies · USHarvard University · USWellcome Sanger Institute · GB

Funding

YY1 FUNCTIONS IN VASCULAR SMOOTH MUSCLE CELLSR01HL062458 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI USHEVA-SIMIDJIYSKA, ANNY · 2000 to 2008
$2.6M
Promoter Prediction Using the Opening Profile of DNAR01GM073911 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI USHEVA-SIMIDJIYSKA, ANNY · 2005 to 2009
$1.3M
NHLBI NIH HHS R01 HL062458NIGMS NIH HHS R01 GM073911
6 · The paper itself

Abstract

We report that terahertz (THz) irradiation of mouse mesenchymal stem cells (mMSCs) with a single-frequency (SF) 2.52 THz laser or pulsed broadband (centered at 10 THz) source results in irradiation specific heterogenic changes in gene expression. The THz effect depends on irradiation parameters such as the duration and type of THz source, and on the degree of stem cell differentiation. Our microarray survey and RT-PCR experiments demonstrate that prolonged broadband THz irradiation drives mMSCs toward differentiation, while 2-hour irradiation (regardless of THz sources) affects genes transcriptionally active in pluripotent stem cells. The strictly controlled experimental environment indicates minimal temperature changes and the absence of any discernable response to heat shock and cellular stress genes imply a non-thermal response. Computer simulations of the core promoters of two pluripotency markers reveal association between gene upregulation and propensity for DNA breathing. We propose that THz radiation has potential for non-contact control of cellular gene expression.

Indexed as

Terahertz RadiationAnimalsCell DifferentiationGene Expression RegulationMesenchymal Stem CellsMiceOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionTime Factors

Identifiers

PMID23378916
PMCPMC3560359
OpenAlexW2014394741

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.