Evidence map›Paper›PMID 23376943›Full record

ArticleEukaryotic cell2013

Extremely reduced levels of heterozygosity in the vertebrate pathogen Encephalitozoon cuniculi.

Mohammed Selman, Bohumil Sak, Martin Kváč, Laurent Farinelli, Louis M Weiss, Nicolas Corradi

Abstract read
In one paragraph

Article in Eukaryotic cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Polyploidy is widespread in Microsporidia.Microbiology spectrum · 2024
    Article
  4. Article
  5. Morphological characterization and genetic diversity of a new microsporidium,Frontiers in cellular and infection microbiology · 2023
    Article
  6. Comparative Genomics of Microsporidia.Experientia supplementum (2012) · 2022
    Article
  7. Sparse Evidence forPathogens (Basel, Switzerland) · 2021
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Fungal Sex: The Mucoromycota.Microbiology spectrum · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. More than a rabbit's tale -International journal for parasitology. Parasites and wildlife · 2016
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mohammed SelmanCanadian Institute for Advanced Research, Department of Biology, University of Ottawa, Ottawa, Ontario, Canada.
Bohumil Sak
Martin Kváč
Laurent Farinelli
Louis M Weiss
Nicolas Corradi

Funding

New Opportunistic Infections in AIDS MicrosporidosisR01AI031788 · NIAID · YESHIVA UNIVERSITY · PI WEISS, LOUIS M. · 1992 to 2011
$4.6M
NIAID NIH HHS 5R01AI031788-19NIAID NIH HHS R01 AI031788
6 · The paper itself

Abstract

The genomes of microsporidia in the genus Encephalitozoon have been extensively studied for their minimalistic features, but they have seldom been used to investigate basic characteristics of the biology of these organisms, such as their ploidy or their mode of reproduction. In the present study, we aimed to tackle this issue by mapping Illumina sequence reads against the genomes of four strains of E. cuniculi. This approach, combined with more conventional molecular biology techniques, resulted in the identification of heterozygosity in all strains investigated, a typical signature of a diploid nuclear state. In sharp contrast with similar studies recently performed on a distant microsporidian lineage (Nematocida spp.), the level of heterozygosity that we identified across the E. cuniculi genomes was found to be extremely low. This reductive intraindividual genetic variation could result from the long-term propagation of these strains under laboratory conditions, but we propose that it could also reflect an intrinsic capacity of these vertebrate pathogens to self-reproduce.

Indexed as

Genome, FungalHomozygoteSelf-FertilizationAnimalsEncephalitozoon cuniculiGenetic VariationHeterozygoteMammalsPhylogenyPloidiesSequence Analysis, DNA

Identifiers

PMID23376943
PMCPMC3623448

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.