Evidence map›Paper›PMID 23376458›Full record

ArticleHuman immunology2013

HLA class I and II alleles are associated with microvascular complications of type 1 diabetes.

E M Lipner, Y Tomer, J A Noble, M C Monti, J T Lonsdale, B Corso, W C L Stewart, D A Greenberg

Abstract read
In one paragraph

Article in Human immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Hub Genes Associated with the Diagnosis of Diabetic Retinopathy.International journal of general medicine · 2021
    Article
  4. Review
  5. Article
  6. Update on genetics and diabetic retinopathy.Clinical ophthalmology (Auckland, N.Z.) · 2015
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

E M LipnerDepartment of Epidemiology, Columbia University, Mailman School of Public Health, New York, NY, USA.
Y Tomer
J A Noble
M C Monti
J T Lonsdale
B Corso
W C L Stewart
D A Greenberg
Battelle · USUniversity of Pavia · ITColumbia University · USMount Sinai Medical Center · US

Funding

RESOLVING HETEROGENEITY IN EPILEPSY WITH GENETIC MARKERSR01NS027941 · NINDS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI GREENBERG, DAVID A. · 1990 to 2010
$9.0M
Mapping Autoimmune Diabetes and Thyroiditis GenesR01DK067555 · NIDDK · UNIVERSITY OF CINCINNATI · PI MIHAELA STEFAN LIFSHITZ, YARON TOMER · 2005 to 2026
$5.8M
Thyroid Derived Peptide Presentation by HLA-DR in ThyroiditisR01DK073681 · NIDDK · UNIVERSITY OF CINCINNATI · PI TOMER, YARON · 2006 to 2022
$5.0M
Identifying Genes Linked to Autoimmune Thyroid DiseasesR01DK061659 · NIDDK · UNIVERSITY OF CINCINNATI · PI TOMER, YARON · 2002 to 2017
$4.1M
The genetic basis of type 1 diabetes autoimmunity in African AmericansR01DK061722 · NIDDK · CHILDREN'S HOSPITAL &RES CTR AT OAKLAND · PI NOBLE, JANELLE A · 2003 to 2013
$3.5M
Mechanisms of Genetic Seizure Susceptibility in Juvenile Myoclonic EpilepsyR01NS061829 · NINDS · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI GREENBERG, DAVID A. · 2009 to 2012
$2.0M
Genetic Analysis: Psychiatric and Other Complex DiseasesT32MH065213 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WEISSMAN, MYRNA M · 2002 to 2011
$1.7M
PSYCHIATRIC GENETICS AND FAMILY STUDIES--ROBUST METHODSR01MH048858 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HODGE, SUSAN E. · 1992 to 2010
$1.5M
The Role of Genome-Coded ME2 in EpilepsyR21NS070323 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENBERG, DAVID A. · 2009 to 2010
$798k
The genetic basis of type 1 diabetes autoimmunity in African AmericansR56DK061722 · NIDDK · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI NOBLE, JANELLE A · 2008 to 2008
$311k
NIDDK NIH HHS DK067555NIDDK NIH HHS DK073681NIDDK NIH HHS DK61659NIDDK NIH HHS DK61722NIDDK NIH HHS R01 DK061659NIDDK NIH HHS R01 DK061722NIDDK NIH HHS R01 DK067555NIDDK NIH HHS R01 DK073681NIDDK NIH HHS R56 DK061722NIMH NIH HHS MH48858NIMH NIH HHS R01 MH048858NIMH NIH HHS T32 MH065213NIMH NIH HHS T32 MH65213NINDS NIH HHS NS27941NINDS NIH HHS NS61829NINDS NIH HHS NS70323NINDS NIH HHS R01 NS027941NINDS NIH HHS R01 NS061829NINDS NIH HHS R21 NS070323
6 · The paper itself

Abstract

Although HLA alleles are associated with type 1 diabetes, association with microvascular complications remains controversial. We tested HLA association with complications in multiplex type 1 diabetes families. Probands from 425 type 1 diabetes families from the Human Biological Data Interchange (HBDI) collection were analyzed. The frequencies of specific HLA alleles in patients with complications were compared with the frequencies in complications-free patients. The complications we examined were: retinopathy, neuropathy, and nephropathy. We used logistic regression models with covariates to estimate odds ratios. We found that the DRB1*03:01 allele is a protective factor for complications (OR=0.58; p=0.03), as is the DQA1*05:01-DQB1*02:01 haplotype found in linkage disequilibrium with DRB1*03:01 (OR=0.59; p=0.031). The DRB1*04:01 allele showed no evidence of association (OR=1.13; p=0.624), although DRB1*04:01 showed suggestive evidence when the carriers of the protective DRB1*03:01 were removed from the analysis. The class II DQA1*03:01-DQB1*03:02 haplotype was not associated with complications, but the class I allele B*39:06 (OR=3.27; p=0.008) suggested a strong positive association with complications. Our results show that in type 1 diabetes patients, specific HLA alleles may be involved in susceptibility to, or protection from, microvascular complications.

Indexed as

AllelesDiabetes Mellitus, Type 1Diabetic NephropathiesDiabetic NeuropathiesDiabetic RetinopathyFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHaplotypesHLA AntigensHLA-B AntigensHLA-DQ alpha-ChainsHLA-DRB1 ChainsHumansLogistic ModelsHLA AntigensHLA-B AntigensHLA-DQA1 antigenHLA-DQ alpha-ChainsHLA-DRB1 Chains

Identifiers

PMID23376458
PMCPMC3686564
OpenAlexW2027676429

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.