Evidence map›Paper›PMID 23371947›Full record

ArticleThe Plant cell2013

Arabidopsis paired amphipathic helix proteins SNL1 and SNL2 redundantly regulate primary seed dormancy via abscisic acid-ethylene antagonism mediated by histone deacetylation.

Zhi Wang, Hong Cao, Yongzhen Sun, Xiaoying Li, Fengying Chen, Annaick Carles, Yong Li, Meng Ding, Cun Zhang, Xin Deng and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
12.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 182 citations in OpenAlex.

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  14. Structure-function analyses revealCurrent research in structural biology · 2024
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  17. Ectopic Expression ofInternational journal of molecular sciences · 2022
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  20. Interaction Analysis between theInternational journal of molecular sciences · 2022
    Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Zhi WangKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Hong Cao
Yongzhen Sun
Xiaoying Li
Fengying Chen
Annaick Carles
Yong Li
Meng Ding
Cun Zhang
Xin Deng
Wim J J Soppe
Yong-Xiu Liu
Chinese Academy of Sciences · CNInstitute of Botany · CNUniversity of Freiburg · DEMax Planck Institute for Plant Breeding Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone (de)acetylation is a highly conserved chromatin modification that is vital for development and growth. In this study, we identified a role in seed dormancy for two members of the histone deacetylation complex in Arabidopsis thaliana, SIN3-LIKE1 (SNL1) and SNL2. The double mutant snl1 snl2 shows reduced dormancy and hypersensitivity to the histone deacetylase inhibitors trichostatin A and diallyl disulfide compared with the wild type. SNL1 interacts with HISTONE DEACETYLASE19 in vitro and in planta, and loss-of-function mutants of SNL1 and SNL2 show increased acetylation levels of histone 3 lysine 9/18 (H3K9/18) and H3K14. Moreover, SNL1 and SNL2 regulate key genes involved in the ethylene and abscisic acid (ABA) pathways by decreasing their histone acetylation levels. Taken together, we showed that SNL1 and SNL2 regulate seed dormancy by mediating the ABA-ethylene antagonism in Arabidopsis. SNL1 and SNL2 could represent a cross-link point of the ABA and ethylene pathways in the regulation of seed dormancy.

Indexed as

Signal TransductionAbscisic AcidAcetylationAllyl CompoundsArabidopsisArabidopsis ProteinsChromatin ImmunoprecipitationDisulfidesEthylenesGene Expression Regulation, PlantGerminationHistone DeacetylasesHistonesHydroxamic AcidsModels, MolecularMutagenesis, InsertionalAbscisic AcidAllyl CompoundsArabidopsis Proteinsdiallyl disulfideDisulfidesethyleneEthylenesHDA19 protein, ArabidopsisHistone DeacetylasesHistonesHydroxamic AcidsPlant Growth RegulatorsRepressor ProteinsSNL1 protein, ArabidopsisSNL2 protein, Arabidopsistrichostatin A

Identifiers

PMID23371947
PMCPMC3584531
OpenAlexW2168569386

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.