Evidence map›Paper›PMID 23370786›Full record

ArticleJournal of molecular modeling2013

DFT comparison of the OH-initiated degradation mechanisms for five chlorophenoxy herbicides.

Xiaohua Ren, Youmin Sun, Xiaowen Fu, Li Zhu, Zhaojie Cui

Abstract read
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In one paragraph

Article in Journal of molecular modeling, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 34 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Xiaohua RenSchool of Environmental Science and Engineering, Shandong University, Jinan 250100, People's Republic of China.
Youmin Sun
Xiaowen Fu
Li Zhu
Zhaojie Cui
Shandong University · CNShandong Jianzhu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To compare the OH-initiated reaction mechanisms of five chlorophenoxy herbicides, density functional theory (DFT) calculations of reactions in which ·OH attacks one of three active positions on each herbicide were carried out at the MPWB1K/6-311 + G(3df,2p)//MPWB1K/6-31 + G(d,p) level. For each herbicide, the calculation results show that ·OH addition to the C1 atom, which is the nexus between the benzene ring and the side group, possesses the lowest energy barrier among the three kinds of reactions, indicating that ·OH addition-substitution of the side chain is the most energetically and kinetically favorable reaction mechanism. Comparisons among the herbicides show that the mechanisms are affected by the steric hindrance and the electronegativities of the -CH₃ and -Cl groups. When comparing the addition of ·OH to the C1 site among the five herbicides, the activation energy for the reaction of ·OH with DCPP reaction is the lowest (3.61 kcal mol(-1)), while that for the ·OH and 4-CPA reaction was the highest (5.91 kcal mol(-1)). ·OH addition to the C4 site presents the highest energy barriers among the three kinds of reactions, indicating that the para Cl is difficult to break down. When comparing the H-atom abstraction reactions of the five herbicides, the H atoms in the -CH₂- group of 2,4-D are the easiest for ·OH to abstract, whereas those of DCPP and MCPP are more difficult to abstract, due to the steric hindrance of the -CH₃ group. Additionally, the results obtained from the PCM calculations reveal that most of the reactions occur more easily in water than in gas, though the mechanisms involved are the same as those discussed above.

Indexed as

HerbicidesHydroxyl RadicalKineticsModels, MolecularMolecular StructureOxidation-ReductionPhase TransitionSolventsWaterHerbicidesHydroxyl RadicalSolventsWater

Identifiers

PMID23370786
OpenAlexW2088196783

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.