Evidence map›Paper›PMID 23364793›Full record

ArticleThe Journal of biological chemistry2013

The near-iron transporter (NEAT) domains of the anthrax hemophore IsdX2 require a critical glutamine to extract heme from methemoglobin.

Erin S Honsa, Cedric P Owens, Celia W Goulding, Anthony W Maresso

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Heme Synthesis and Acquisition in Bacterial Pathogens.Journal of molecular biology · 2016
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Heme uptake in bacterial pathogens.Current opinion in chemical biology · 2014
    Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Erin S HonsaDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030.
Cedric P OwensDepartments of Molecular Biology and Biochemistry, University of California, Irvine, California 92617.
Celia W GouldingDepartments of Molecular Biology and Biochemistry, University of California, Irvine, California 92617.
Anthony W MaressoDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030. Electronic address: maresso@bcm.edu.
Baylor College of Medicine · USUniversity of California, Irvine · US

Funding

Nutrient Uptake during Anthrax DiseaseR01AI097167 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2012 to 2022
$3.5M
Structural And Biochemical Characterization Of A Novel Mycobacterial Heme UptakeR01AI081161 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI GOULDING, CELIA · 2009 to 2013
$1.8M
Branched Chain Amino Acid Metabolism During AnthraxR21AI146481 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2019 to 2020
$440k
Bacterial Heme Transport by non-Isd NEAT ProteinsR21AI096314 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI MARESSO, ANTHONY W · 2012 to 2013
$430k
Characterization of Heme Acquisition in B. anthracisF32AI069697 · NIAID · UNIVERSITY OF CHICAGO · PI MARESSO, ANTHONY W · 2007 to 2008
$58k
NIAID NIH HHS AI069697NIAID NIH HHS AI081161NIAID NIH HHS AI097167NIAID NIH HHS F32 AI069697NIAID NIH HHS R01 AI081161NIAID NIH HHS R01 AI097167NIAID NIH HHS R21 AI096314NIAID NIH HHS R21 AI146481
6 · The paper itself

Abstract

Several gram-positive pathogenic bacteria employ near-iron transporter (NEAT) domains to acquire heme from hemoglobin during infection. However, the structural requirements and mechanism of action for NEAT-mediated heme extraction remains unknown. Bacillus anthracis exhibits a rapid growth rate during systemic infection, suggesting that the bacterium expresses efficient iron acquisition systems. To understand how B. anthracis acquires iron from heme sources, which account for 80% of mammalian iron stores, we investigated the properties of the five-NEAT domain hemophore IsdX2. Using a combination of bioinformatics and site-directed mutagenesis, we determined that the heme extraction properties of IsdX2 are dependent on an amino acid with an amide side chain within the 310-helix of the NEAT domain. Additionally, we used a spectroscopic analysis to show that IsdX2 NEAT domains only scavenge heme from methemoglobin (metHb) and that autoxidation of oxyhemoglobin to metHb must occur prior to extraction. We also report the crystal structures of NEAT5 wild type and a Q29T mutant and present surface plasmon resonance data that indicate that the loss of this amide side chain reduces the affinity of the NEAT domain for metHb. We propose a model whereby the amide side chain is first required to drive an interaction with metHb that destabilizes heme, which is subsequently extracted and coordinated in the aliphatic heme-binding environment of the NEAT domain. Because an amino acid with an amide side chain in this position is observed in NEAT domains of several genera of gram-positive pathogenic bacteria, these results suggest that specific targeting of this or nearby residues may be an entry point for inhibitor development aimed at blocking bacterial iron acquisition during infection.

Indexed as

Bacillus anthracisAmino Acid SequenceAmino Acid SubstitutionBacterial ProteinsBinding SitesCrystallography, X-RayGlutamineHemeImmobilized ProteinsMethemoglobinMolecular Sequence DataMutagenesis, Site-DirectedOxyhemoglobinsProtein BindingProtein Interaction Domains and MotifsProtein Structure, SecondaryBacterial ProteinsGlutamineHemeImmobilized ProteinsMethemoglobinOxyhemoglobins

Identifiers

PMID23364793
PMCPMC3605663
OpenAlexW1978054338

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.