Evidence map›Paper›PMID 23362284›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2013

Association of human leukocyte antigen alleles and nevirapine hypersensitivity in a Malawian HIV-infected population.

Daniel F Carr, Mas Chaponda, Andrea L Jorgensen, Elena Cornejo Castro, Joep J van Oosterhout, Saye H Khoo, David G Lalloo, Robert S Heyderman, Ana Alfirevic, Munir Pirmohamed

Open access · bronzeAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 2 pooled it
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 2 syntheses or guidelines pooled it, 110 citations in OpenAlex.

  1. Genetic testing for prevention of severe drug-induced skin rash.The Cochrane database of systematic reviews · 2019
    Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Updates in the pathogenesis of SJS/TEN.Allergology international : official journal of the Japanese Society of Allergology · 2025
    Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Evolution ofFrontiers in pharmacology · 2022
    Article
  14. The Immunogenetics of Cutaneous Drug Reactions.Advances in experimental medicine and biology · 2022
    Article
  15. HLA-associated adverse drug reactions - scoping review.Clinical and translational science · 2021
    Article
  16. Progress in study on the association between HLA genetic variation and adverse drug reactions.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Clinical and pathogenic aspects of the severe cutaneous adverse reaction epidermal necrolysis (EN).Journal of the European Academy of Dermatology and Venereology : JEADV · 2020
    Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Daniel F CarrDepartment of Molecular and Clinical Pharmacology, University of Liverpool, United Kingdom.
Mas Chaponda
Andrea L Jorgensen
Elena Cornejo Castro
Joep J van Oosterhout
Saye H Khoo
David G Lalloo
Robert S Heyderman
Ana Alfirevic
Munir Pirmohamed
University of Liverpool · GBLiverpool School of Tropical Medicine · GBMalawi-Liverpool-Wellcome Trust Clinical Research Programme · MW

Funding

Wellcome Trust 078857MAWellcome Trust 100890Wellcome Trust 101113
6 · The paper itself

Abstract

backgroundThe nonnucleoside reverse transcriptase inhibitor nevirapine is the cornerstone of treatment for human immunodeficiency virus (HIV) in many sub-Saharan African countries. However, nevirapine is associated with a 6%-10% risk of developing a hypersensitivity reaction, with different phenotypes, including the blistering conditions Stevens-Johnson syndrome (SJS) and toxic epidermal necrolysis (TEN). Our aim was to identify predictive human leukocyte antigen (HLA) markers that are associated with nevirapine hypersensitivity.

methodsWe identified 117 HIV-infected Malawian adults with nevirapine hypersensitivity (15 drug-induced liver injury [DILI], 33 SJS/TEN, 20 hypersensitivity syndrome, and 46 nevirapine-induced rash plus 3 with both DILI and SJS phenotype) and 155 age-, sex- and ethnicity-matched nevirapine-exposed controls. HLA typing for 5 loci (A, B, C, DRB1, and DQB1) was undertaken using a sequence-based high-resolution protocol. Logistic regression analysis included CD4(+) cell count as a covariate.

resultsHLA-C*04:01 was found to markedly increase the risk for SJS (odds ratio [OR] = 17.52; 95% confidence interval, 3.31-92.80) and all hypersensitivity phenotypes (OR = 2.64; 95% CI, 1.13-6.18) when compared to the baseline rare allele group in a binary logistic regression model. The OR for absolute risk of SJS/TEN associated with carriage of HLA-C*04:01 was 5.17 (95% CI, 2.39-11.18). Positive predictive value was 2.6% and negative predictive value was 99.2%. In addition, a number of alleles within the HLA-DQB1 loci protected against nevirapine-induced hypersensitivity phenotypes.

conclusionsOur study has identified HLA-C*04:01 carriage as a risk factor for nevirapine-induced SJS/TEN in a Malawian HIV cohort. Validation of these findings in a larger cohort of patients and mechanistic investigation of the pathogenesis are required.

Indexed as

AdolescentAdultAnti-HIV AgentsCase-Control StudiesDrug HypersensitivityFemaleGene FrequencyGenetic MarkersHIV InfectionsHLA AntigensHumansMalawiMaleNevirapineSequence Analysis, DNAYoung AdultAnti-HIV AgentsGenetic MarkersHLA AntigensNevirapine

Identifiers

PMID23362284
PMCPMC3616517
OpenAlexW2120874287

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.