Evidence map›Paper›PMID 23362207›Full record

ArticleThe Plant cell2013

HISTONE DEACETYLASE19 interacts with HSL1 and participates in the repression of seed maturation genes in Arabidopsis seedlings.

Yi Zhou, Bin Tan, Ming Luo, Yin Li, Chen Liu, Chen Chen, Chun-Wei Yu, Songguang Yang, Shuai Dong, Jiuxiao Ruan and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 181 citations in OpenAlex.

  1. Article
  2. Review
  3. Histone deacetylase BrHDA19 is involved in regulating bolting time in Chinese cabbage.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  14. Revisiting plant stress memory: mechanisms and contribution to stress adaptation.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  15. Review
  16. Review
  17. Article
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  19. Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 3 countries.

Yi ZhouState Key Laboratory of Biocontrol and Guangdong Key Laboratory of Plant Resource, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
Bin Tan
Ming Luo
Yin Li
Chen Liu
Chen Chen
Chun-Wei Yu
Songguang Yang
Shuai Dong
Jiuxiao Ruan
Liangbin Yuan
Zhou Zhang
Linmao Zhao
Chenlong Li
Huhui Chen
Yuhai Cui
Keqiang Wu
Shangzhi Huang
Sun Yat-sen University · CNChinese Academy of Sciences · CNLondon Research and Development CentreNational Taiwan University · TWAgriculture and Agri-Food Canada · CASouth China Botanical Garden · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The seed maturation genes are specifically and highly expressed during late embryogenesis. In this work, yeast two-hybrid, bimolecular fluorescence complementation, and coimmunoprecipitation assays revealed that HISTONE DEACETYLASE19 (HDA19) interacted with the HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE2-LIKE1 (HSL1), and the zinc-finger CW [conserved Cys (C) and Trp (W) residues] domain of HSL1 was responsible for the interaction. Furthermore, we found that mutations in HDA19 resulted in the ectopic expression of seed maturation genes in seedlings, which was associated with increased levels of gene activation marks, such as Histone H3 acetylation (H3ac), Histone H4 acetylation (H4ac), and Histone H3 Lys 4 tri-methylation (H3K4me3), but decreased levels of the gene repression mark Histone H3 Lys 27 tri-methylation (H3K27me3) in the promoter and/or coding regions. In addition, elevated transcription of certain seed maturation genes was also found in the hsl1 mutant seedlings, which was also accompanied by the enrichment of gene activation marks but decreased levels of the gene repression mark. Chromatin immunoprecipitation assays showed that HDA19 could directly bind to the chromatin of the seed maturation genes. These results suggest that HDA19 and HSL1 may act together to repress seed maturation gene expression during germination. Further genetic analyses revealed that the homozygous hsl1 hda19 double mutants are embryonic lethal, suggesting that HDA19 and HSL1 may play a vital role during embryogenesis.

Indexed as

Gene Expression Regulation, PlantAcetylationArabidopsisArabidopsis ProteinsChromatin ImmunoprecipitationGene Expression Regulation, DevelopmentalHistone DeacetylasesHistonesMethylationMutationOrgan SpecificityPlants, Genetically ModifiedProtein Structure, TertiaryRepressor ProteinsSeedlingsSeedsArabidopsis ProteinsHDA19 protein, ArabidopsisHistone DeacetylasesHistonesHSL1 protein, ArabidopsisRepressor Proteins

Identifiers

PMID23362207
PMCPMC3584530
OpenAlexW1982199910

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.