Evidence map›Paper›PMID 23362085›Full record

ArticleStroke2013

Common variants within oxidative phosphorylation genes influence risk of ischemic stroke and intracerebral hemorrhage.

Christopher D Anderson, Alessandro Biffi, Michael A Nalls, William J Devan, Kristin Schwab, Alison M Ayres, Valerie Valant, Owen A Ross, Natalia S Rost, Richa Saxena and 24 more

Open access · bronzeAbstract readComparative StudyMulticenter Study
In one paragraph

Article in Stroke, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. The MTHFR C677T Polymorphism and Risk of Intracerebral Hemorrhage in a Chinese Han Population.Medical science monitor : international medical journal of experimental and clinical research · 2016
    Pooled it
  2. Review
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  17. Mitophagy, a potential therapeutic target for stroke.Journal of biomedical science · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 12 institutions in 3 countries.

Christopher D AndersonMassachusetts General Hospital, Boston, MA 02114, USA. cdanderson@partners.org
Alessandro Biffi
Michael A Nalls
William J Devan
Kristin Schwab
Alison M Ayres
Valerie Valant
Owen A Ross
Natalia S Rost
Richa Saxena
Anand Viswanathan
Bradford B Worrall
Thomas G Brott
Joshua N Goldstein
Devin Brown
Joseph P Broderick
Bo Norrving
Steven M Greenberg
Scott L Silliman
Björn M Hansen
David L Tirschwell
Arne Lindgren
Agnieszka Slowik
Reinhold Schmidt
Magdy Selim
Jaume Roquer
Joan Montaner
Andrew B Singleton
Chelsea S Kidwell
Daniel Woo
Karen L Furie
James F Meschia
Jonathan Rosand
International Stroke Genetics Consortium
Harvard University Press · USLund University · SEJacksonville College · USNational Institutes of Health · USUniversitat Autònoma de Barcelona · ESUniversity of Cincinnati · USGeorgetown University · USUniversity of Florida · USUniversity of Michigan–Ann Arbor · USUniversity of Virginia · USUniversity of Washington · USWinnMed · US

Funding

ZINC GLUCONATE GLYCINE LOZENGES &VITAMIN C EFFECTS ON COMMON COLDM01RR000042 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELSTROM, REBECCA L · 1985 to 2007
$40.8M
STROKE INCIDENCE AND OUTCOME AMONG BLACKS AND WHITESR01NS030678 · NINDS · UNIVERSITY OF CINCINNATI · PI KISSELA, BRETT M, KLEINDORFER, DAWN O · 1993 to 2024
$26.7M
AN NCRR CENTER FOR HIGH THROUGHPUT SNP GENOTYPING AND ANALYSIS: GAIN NETWORKU54RR020278 · NCRR · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2004 to 2008
$14.4M
Genetic&Environment Risk Factors for Hemorrhagic StrokeR01NS036695 · NINDS · UNIVERSITY OF CINCINNATI · PI WOO, DANIEL · 1997 to 2012
$14.1M
THE BALTIMORE LONGITUDINAL STUDY OF HUMAN AGINGZ01AG000015 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 1985 to 2008
$11.4M
Stroke Disparities ProgramU54NS057405 · NINDS · GEORGETOWN UNIVERSITY · PI RESNICK, HELAINE E. · 2007 to 2011
$10.4M
The NINDS International Stroke Genetics Consortium StudyU01NS069208 · NINDS · UNIVERSITY OF MARYLAND BALTIMORE · PI KITTNER, STEVEN J · 2010 to 2013
$9.4M
Siblings With Ischemic Stroke Study (SWISS)R01NS039987 · NINDS · MAYO CLINIC JACKSONVILLE · PI MESCHIA, JAMES F · 2000 to 2009
$9.2M
Genetic and Environmental Risk Factors for Hemorrhagic StrokeU01NS036695 · NINDS · UNIVERSITY OF CINCINNATI · PI ROSAND, JONATHAN, WOO, DANIEL · 2016 to 2020
$7.0M
A Genome-wide Association Study for Early-Onset Myocardial InfarctionR01HL087676 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI ALTSHULER, DAVID · 2007 to 2009
$4.7M
Gene Discovery for Warfarin-Related Intracerebral HemorrhageR01NS059727 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI ROSAND, JONATHAN · 2008 to 2012
$4.2M
ISGS: The Ischemic Stroke Genetics StudyR01NS042733 · NINDS · MAYO CLINIC JACKSONVILLE · PI MESCHIA, JAMES F · 2002 to 2006
$3.7M
Intramural NIH HHS Z01 AG000015Intramural NIH HHS Z01 AG000954NCRR NIH HHS M01 RR000042NCRR NIH HHS U54 RR020278NHLBI NIH HHS R01 HL087676NINDS NIH HHS K23 NS042695NINDS NIH HHS K23 NS059774NINDS NIH HHS K23 NS064052NINDS NIH HHS L30 NS060159NINDS NIH HHS NS U54NS057405NINDS NIH HHS R01 NS030678NINDS NIH HHS R01 NS036695NINDS NIH HHS R01 NS039987NINDS NIH HHS R01 NS042147NINDS NIH HHS R01 NS042733NINDS NIH HHS R01 NS059727NINDS NIH HHS RF1 NS036695NINDS NIH HHS U01 NS036695NINDS NIH HHS U01 NS069208NINDS NIH HHS U54 NS057405
6 · The paper itself

Abstract

background and purposePrevious studies demonstrated association between mitochondrial DNA variants and ischemic stroke (IS). We investigated whether variants within a larger set of oxidative phosphorylation (OXPHOS) genes encoded by both autosomal and mitochondrial DNA were associated with risk of IS and, based on our results, extended our investigation to intracerebral hemorrhage (ICH).

methodsThis association study used a discovery cohort of 1643 individuals, a validation cohort of 2432 individuals for IS, and an extension cohort of 1476 individuals for ICH. Gene-set enrichment analysis was performed on all structural OXPHOS genes, as well as genes contributing to individual respiratory complexes. Gene-sets passing gene-set enrichment analysis were tested by constructing genetic scores using common variants residing within each gene. Associations between each variant and IS that emerged in the discovery cohort were examined in validation and extension cohorts.

resultsIS was associated with genetic risk scores in OXPHOS as a whole (odds ratio [OR], 1.17; P=0.008) and complex I (OR, 1.06; P=0.050). Among IS subtypes, small vessel stroke showed association with OXPHOS (OR, 1.16; P=0.007), complex I (OR, 1.13; P=0.027), and complex IV (OR, 1.14; P=0.018). To further explore this small vessel association, we extended our analysis to ICH, revealing association between deep hemispheric ICH and complex IV (OR, 1.08; P=0.008).

conclusionsThis pathway analysis demonstrates association between common genetic variants within OXPHOS genes and stroke. The associations for small vessel stroke and deep ICH suggest that genetic variation in OXPHOS influences small vessel pathobiology. Further studies are needed to identify culprit genetic variants and assess their functional consequences.

Indexed as

Oxidative PhosphorylationAdultAgedAged, 80 and overCase-Control StudiesCerebral HemorrhageCohort StudiesFemaleGenesGenetic Predisposition to DiseaseGenetic VariationGenotypeHumansMaleMiddle AgedPolymorphism, Single Nucleotide

Identifiers

PMID23362085
PMCPMC3582722
OpenAlexW2037394994

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.