Evidence map›Paper›PMID 23361014›Full record

ArticleNature communications2013

The evolution and pathogenic mechanisms of the rice sheath blight pathogen.

Aiping Zheng, Runmao Lin, Danhua Zhang, Peigang Qin, Lizhi Xu, Peng Ai, Lei Ding, Yanran Wang, Yao Chen, Yao Liu and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 146 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
146citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

146 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Frontiers in plant science · 2022
    Pooled it
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  14. Quantitative resistance toFrontiers in plant science · 2026
    Article
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  17. Essential Oil ofPlants (Basel, Switzerland) · 2025
    Article
  18. Article
  19. Article
  20. Article

86 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Aiping ZhengState Key Laboratory of Hybrid Rice, Sichuan Agricultural University, Chengdu 611130, China. apzh0602@gmail.com
Runmao Lin
Danhua Zhang
Peigang Qin
Lizhi Xu
Peng Ai
Lei Ding
Yanran Wang
Yao Chen
Yao Liu
Zhigang Sun
Haitao Feng
Xiaoxing Liang
Rongtao Fu
Changqing Tang
Qiao Li
Jing Zhang
Zelin Xie
Qiming Deng
Shuangcheng Li
Shiquan Wang
Jun Zhu
Lingxia Wang
Huainian Liu
Ping Li

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizoctonia solani is a major fungal pathogen of rice (Oryza sativa L.) that causes great yield losses in all rice-growing regions of the world. Here we report the draft genome sequence of the rice sheath blight disease pathogen, R. solani AG1 IA, assembled using next-generation Illumina Genome Analyser sequencing technologies. The genome encodes a large and diverse set of secreted proteins, enzymes of primary and secondary metabolism, carbohydrate-active enzymes, and transporters, which probably reflect an exclusive necrotrophic lifestyle. We find few repetitive elements, a closer relationship to Agaricomycotina among Basidiomycetes, and expand protein domains and families. Among the 25 candidate pathogen effectors identified according to their functionality and evolution, we validate 3 that trigger crop defence responses; hence we reveal the exclusive expression patterns of the pathogenic determinants during host infection.

Indexed as

Biological EvolutionEvolution, MolecularFungal ProteinsGene Expression Regulation, FungalGenes, FungalGlycine maxMolecular Sequence DataOryzaPhenotypePhylogenyPlant DiseasesPlant LeavesRepetitive Sequences, Nucleic AcidReproducibility of ResultsRhizoctoniaSequence Analysis, DNAFungal ProteinsVirulence Factors

Identifiers

PMID23361014
PMCPMC3562461

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.