Evidence map›Paper›PMID 23359552›Full record

ArticleProtein science : a publication of the Protein Society2013

Physicochemical changes in phosphorylase kinase induced by its cationic activator Mg(2+).

Weiya Liu, Owen W Nadeau, Jessica Sage, Gerald M Carlson

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Weiya LiuDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas 66160, USA.
Owen W Nadeau
Jessica Sage
Gerald M Carlson
University of Kansas Medical Center · US

Funding

SUBUNIT INTERACTIONS OF PHOSPHORYLASE KINASER01DK032953 · NIDDK · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI CARLSON, GERALD M · 1986 to 2013
$4.6M
The Glycoside Hydrolase Activity of Phosphorylase KinaseR56DK032953 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI CARLSON, GERALD M · 2009 to 2014
$609k
NIDDK NIH HHS DK32953
6 · The paper itself

Abstract

For over four decades free Mg(2+) ions, that is, those in excess of MgATP, have been reported to affect a wide variety of properties of phosphorylase kinase (PhK), including its affinity for other molecules, proteolysis, chemical crosslinking, phosphorylation, binding to certain monoclonal antibodies, and activity, which is stimulated. Additionally, for over three decades Mg(2+) has been known to act synergistically with Ca(2+) , another divalent activator of PhK, to affect even more properties of the enzyme. During all of this time, however, no study has been performed to determine the overall effects of free Mg(2+) ions on the physical properties of PhK, even though the effects of Ca(2+) ions on PhK's properties are well documented. In this study, changes in the physicochemical properties of PhK induced by Mg(2+) under nonactivating (pH 6.8) and activating (pH 8.2) conditions were investigated by circular dichroism spectroscopy, zeta potential analyses, dynamic light scattering, second derivative UV absorption, negative stain electron microscopy, and differential chemical crosslinking. The effects of the activator Mg(2+) on some of the properties of PhK measured by these techniques were found to be quite different at the two pH values, and displayed both differences and similarities with the effects previously reported to be induced by the activator Ca(2+) (Liu et al., Protein Sci 2008;17:2111-2119). The similarities may reflect the fact that both cations are activators, and foremost among their similarities is the dramatically less negative zeta potential induced by their binding to PhK.

Indexed as

Bridged Bicyclo CompoundsCationsCircular DichroismDinitrofluorobenzeneLightMagnesiumPhosphorylase KinaseProtein ConformationScattering, RadiationStatic Electricity1,5-difluoro-2,4-dinitrobenzeneBridged Bicyclo CompoundsCationsdibromobimaneDinitrofluorobenzeneMagnesiumPhosphorylase Kinase

Identifiers

PMID23359552
PMCPMC3610050
OpenAlexW2027777195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.