Evidence map›Paper›PMID 23359228›Full record

ArticleJournal of natural medicines2013

Psammaplin A inhibits hepatitis C virus NS3 helicase.

Kazi Abdus Salam, Atsushi Furuta, Naohiro Noda, Satoshi Tsuneda, Yuji Sekiguchi, Atsuya Yamashita, Kohji Moriishi, Masamichi Nakakoshi, Masayoshi Tsubuki, Hidenori Tani and 2 more

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Article in Journal of natural medicines, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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  8. Antifungal and antiviral products of marine organisms.Applied microbiology and biotechnology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 10 institutions in 1 country.

Kazi Abdus SalamRadioisotope Center, The University of Tokyo, 2-11-16 Yayoi, Bunkyo-ku, Tokyo, 113-0032, Japan.
Atsushi Furuta
Naohiro Noda
Satoshi Tsuneda
Yuji Sekiguchi
Atsuya Yamashita
Kohji Moriishi
Masamichi Nakakoshi
Masayoshi Tsubuki
Hidenori Tani
Junichi Tanaka
Nobuyoshi Akimitsu
National Institute of Advanced Industrial Science and Technology · JPWaseda University · JPEbara (Japan) · JPHoshi University · JPJapan Radioisotope Association · JPNational Institute for Environmental Studies · JPThe University of Tokyo · JPUniversity of the Ryukyus · JPUniversity of Yamanashi · JPUniversity of Yamanashi Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis C virus (HCV) is the causative agent of hepatitis C, a chronic infectious disease that can lead to development of hepatocellular carcinoma. The NS3 nucleoside triphosphatase (NTPase)/helicase has an essential role in HCV replication, and is therefore an attractive target for direct-acting antiviral strategies. In this study, we employed high-throughput screening using a photo-induced electron transfer (PET) system to identify an inhibitor of NS3 helicase from marine organism extracts. We successfully identified psammaplin A as a novel NS3 inhibitor. The dose-response relationship clearly demonstrates the inhibition of NS3 RNA helicase and ATPase activities by psammaplin A, with IC₅₀ values of 17 and 32 μM, respectively. Psammaplin A has no influence on the apparent Km value (0.4 mM) of NS3 ATPase activity, and acts as a non-competitive inhibitor. Additionally, it inhibits the binding of NS3 to single-stranded RNA in a dose-dependent manner. Furthermore, psammaplin A shows an inhibitory effect on viral replication, with EC₅₀ values of 6.1 and 6.3 μM in subgenomic replicon cells derived from genotypes 1b and 2a, respectively. We postulate that psammaplin A is a potential anti-viral agent through the inhibition of ATPase, RNA binding and helicase activities of NS3.

Indexed as

Adenosine TriphosphatasesAnimalsAntiviral AgentsCell LineDEAD-box RNA HelicasesDisulfidesHepacivirusNucleoside-TriphosphataseRNARNA HelicasesSerine EndopeptidasesTyrosineViral Nonstructural ProteinsViral ProteasesVirus ReplicationAdenosine TriphosphatasesAntiviral AgentsDEAD-box RNA HelicasesDisulfidesNS3 protein, hepatitis C virusNucleoside-Triphosphatasepsammaplin ARNARNA HelicasesSerine EndopeptidasesTyrosineViral Nonstructural ProteinsViral Proteases

Identifiers

PMID23359228
OpenAlexW1985549524

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.