Evidence map›Paper›PMID 23358848›Full record

ArticlePLoS pathogens2013

Memory T cells in latent Mycobacterium tuberculosis infection are directed against three antigenic islands and largely contained in a CXCR3+CCR6+ Th1 subset.

Cecilia S Lindestam Arlehamn, Anna Gerasimova, Federico Mele, Ryan Henderson, Justine Swann, Jason A Greenbaum, Yohan Kim, John Sidney, Eddie A James, Randy Taplitz and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 179 papers.

0numbers the graph read from it
0cells of the map it votes in
179citing papers in PubMed
14.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

179 citing papers in PubMed, 272 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Human memory CD4bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Immunodominant Tuberculosis Antigens Recognized by Human CD4Cold Spring Harbor perspectives in medicine · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Immunometabolic reprogramming ofFrontiers in tuberculosis · 2026
    Article
  17. Article
  18. A proteome-wide atlas of humoral immunity toFrontiers in immunology · 2026
    Article
  19. Review
  20. Article

119 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Cecilia S Lindestam ArlehamnLa Jolla Institute for Allergy and Immunology, La Jolla, California, United States of America.
Anna Gerasimova
Federico Mele
Ryan Henderson
Justine Swann
Jason A Greenbaum
Yohan Kim
John Sidney
Eddie A James
Randy Taplitz
Denise M McKinney
William W Kwok
Howard Grey
Federica Sallusto
Bjoern Peters
Alessandro Sette
La Jolla Institute for Immunology · USBenaroya Research InstituteUniversity of California, San Diego · US

Funding

NIAID NIH HHS N01-AI-900044C
6 · The paper itself

Abstract

An understanding of the immunological footprint of Mycobacterium tuberculosis (MTB) CD4 T cell recognition is still incomplete. Here we report that human Th1 cells specific for MTB are largely contained in a CXCR3(+)CCR6(+) memory subset and highly focused on three broadly immunodominant antigenic islands, all related to bacterial secretion systems. Our results refute the notion that secreted antigens act as a decoy, since both secreted proteins and proteins comprising the secretion system itself are targeted by a fully functional T cell response. In addition, several novel T cell antigens were identified which can be of potential diagnostic use, or as vaccine antigens. These results underline the power of a truly unbiased, genome-wide, analysis of CD4 MTB recognition based on the combined use of epitope predictions, high throughput ELISPOT, and T cell libraries using PBMCs from individuals latently infected with MTB.

Indexed as

Immunologic MemoryAdultAgedGenome, BacterialGenome-Wide Association StudyHost-Pathogen InteractionsHumansLatent TuberculosisMiddle AgedMycobacterium tuberculosisReceptors, CCR6Receptors, CXCR3Th1 CellsYoung AdultCCR6 protein, humanCXCR3 protein, humanReceptors, CCR6Receptors, CXCR3

Identifiers

PMID23358848
PMCPMC3554618
OpenAlexW2027189611

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.