Evidence map›Paper›PMID 23358418›Full record

ArticleMolecular and cellular biology2013

Identification of a novel prenyl and palmitoyl modification at the CaaX motif of Cdc42 that regulates RhoGDI binding.

Akiyuki Nishimura, Maurine E Linder

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 90 citations in OpenAlex.

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  14. Molecular subversion of Cdc42 signalling in cancer.Biochemical Society transactions · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Akiyuki NishimuraDepartment of Molecular Medicine, Cornell University College of Veterinary Medicine, Ithaca, New York, USA.
Maurine E Linder
Cornell University · US

Funding

PROTEIN PALMITOYLATION IN SIGNALING SYSTEMSR01GM051466 · NIGMS · WASHINGTON UNIVERSITY · PI LINDER, MAURINE E · 1994 to 2010
$3.2M
NIGMS NIH HHS GM051466NIGMS NIH HHS R01 GM051466
6 · The paper itself

Abstract

Membrane localization of Rho GTPases is essential for their biological functions and is dictated in part by a series of posttranslational modifications at a carboxyl-terminal CaaX motif: prenylation at cysteine, proteolysis of the aaX tripeptide, and carboxymethylation. The fidelity and variability of these CaaX processing steps are uncertain. The brain-specific splice variant of Cdc42 (bCdc42) terminates in a CCIF sequence. Here we show that brain Cdc42 undergoes two different types of posttranslational modification: classical CaaX processing or novel tandem prenylation and palmitoylation at the CCaX cysteines. In the dual lipidation pathway, bCdc42 was prenylated, but it bypassed proteolysis and carboxymethylation to undergo modification with palmitate at the second cysteine. The alternative postprenylation processing fates were conserved in the GTPases RalA and RalB and the phosphatase PRL-3, proteins terminating in a CCaX motif. The differentially modified forms of bCdc42 displayed functional differences. Prenylated and palmitoylated brain Cdc42 did not interact with RhoGDIα and was enriched in the plasma membrane relative to the classically processed form. The alternative processing of prenylated CCaX motif proteins by palmitoylation or by endoproteolysis and methylation expands the diversity of signaling GTPases and enables another level of regulation through reversible modification with palmitate.

Indexed as

Amino Acid MotifsAnimalsBraincdc42 GTP-Binding ProteinCell LineCell Line, TumorCell MembraneCysteineGTP PhosphohydrolasesHEK293 CellsHeLa CellsHumansKidneyLipoylationMethylationMiceARHGDIA protein, humancdc42 GTP-Binding ProteinCysteineGTP PhosphohydrolasesNeoplasm ProteinsNeopreneprenylProtein Tyrosine PhosphatasesPTP4A3 protein, humanRALA protein, humanRalb protein, humanral GTP-Binding Proteinsrho Guanine Nucleotide Dissociation Inhibitor alpha

Identifiers

PMID23358418
PMCPMC3624279
OpenAlexW2035998109

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.