Evidence map›Paper›PMID 23354361›Full record

ArticleExtremophiles : life under extreme conditions2013

Isolation of cold-active, acidic endocellulase from Ladakh soil by functional metagenomics.

Archana Bhat, Syed Riyaz-Ul-Hassan, Nasier Ahmad, Nidhi Srivastava, Sarojini Johri

Abstract read
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Cold-Adapted Proteases: An Efficient and Energy-Saving Biocatalyst.International journal of molecular sciences · 2023
    Review
  8. Article
  9. Characterization of a GH8 β-1,4-Glucanase fromJournal of microbiology and biotechnology · 2021
    Article
  10. Review
  11. A Novel Cold-Adaptive Endo-1,4-β-Glucanase FromFrontiers in microbiology · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Archana BhatMicrobial Biotechnology Division, Indian Institute of Integrative Medicine, Canal Road, Jammu Tawi, Jammu, India. archanabhatbiotech@gmail.com
Syed Riyaz-Ul-Hassan
Nasier Ahmad
Nidhi Srivastava
Sarojini Johri
Indian Institute of Integrative Medicine · INBanasthali University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mining of soil sample from cold desert of Ladakh by functional metagenomics led to the isolation of cold-adapted endocellulase (CEL8M) that hydrolyses carboxymethyl cellulose (CMC). Mature CEL8M, a 347-residue polypeptide with a molecular mass of 38.9 kDa showed similarity to β-1,3-1,4 D-glucanase from Klebsiella sp. The enzyme contains the catalytic module of glycosyl hydrolase family 8 but does not possess a carbohydrate-binding domain. 3D structural model of the enzyme built by homology modeling showed an architecture of (α/α)6-barrel fold. The purified enzyme was found to be active against CMC, xylan, colloidal chitosan and lichenan but not active against avicel. Glucose was not among the initial hydrolysis products, indicating an endo mode of action. CEL8M displayed maximal activity at pH 4.5 and remained significantly active (~28 %) when the temperature decreased to 10 °C. Cold-active endocellulase CEL8M may find applications in textile industry at low temperature which can result in energy savings.

Indexed as

MetagenomicsSoil MicrobiologyAdaptation, BiologicalAmino Acid MotifsAmino Acid SequenceBacterial ProteinsBinding SitesCarbohydrate MetabolismCatalytic DomainCellulasesCold TemperatureDesert ClimateHydrogen-Ion ConcentrationHydrolysisIndiaKlebsiellaBacterial ProteinsCellulases

Identifiers

PMID23354361
OpenAlexW2155594555

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.