Evidence map›Paper›PMID 23354287›Full record

ArticleNature chemical biology2013

A new structural paradigm in copper resistance in Streptococcus pneumoniae.

Yue Fu, Ho-Ching Tiffany Tsui, Kevin E Bruce, Lok-To Sham, Khadine A Higgins, John P Lisher, Krystyna M Kazmierczak, Michael J Maroney, Charles E Dann, Malcolm E Winkler and 1 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 92 citations in OpenAlex.

  1. Review
  2. AccA fromChemical science · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. The five homologous CiaR-controlled Ccn sRNAs ofbioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Orchestrating copper binding: structure and variations on the cupredoxin fold.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2022
    Review
  13. Unique underlying principles shaping copper homeostasis networks.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. The CopA2-Type PFrontiers in microbiology · 2021
    Article
  20. Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yue FuDepartment of Chemistry, Indiana University, Bloomington, Indiana, USA.
Ho-Ching Tiffany Tsui
Kevin E Bruce
Lok-To Sham
Khadine A Higgins
John P Lisher
Krystyna M Kazmierczak
Michael J Maroney
Charles E Dann
Malcolm E Winkler
David P Giedroc
Indiana University Bloomington · USUniversity of Massachusetts Amherst · US

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
ZINC COORDINATION AND REGULATION OF ZINC METALLOPROTEINSR01GM042569 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI GIEDROC, DAVID P. · 1996 to 2015
$4.9M
Structural Parameters Involved in Metal RecognitionR01GM069696 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI MARONEY, MICHAEL J · 2004 to 2017
$3.3M
Molecular Analyses of Folate and Antifolate TransportR01GM094472 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI DANN, CHARLES E. · 2010 to 2014
$1.4M
Graduate Program in Quantitative and Chemical Biology at Indiana University BloomT32GM109825 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI GIEDROC, DAVID P. · 2014 to 2018
$926k
Roles of Phosphate Uptake in Pneumococcal Antibiotic Resistance and VirulenceR21AI095814 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI WINKLER, MALCOLM E. · 2012 to 2013
$423k
ZINC DOMAIN STRUCTURE AND FUNCTION IN T4 GENE 32 PROTEINR29GM042569 · NIGMS · TEXAS AGRILIFE RESEARCH · PI GIEDROC, DAVID P. · 1991 to 1995
–
NCATS NIH HHS UL1 TR000124NIAID NIH HHS AI095814NIAID NIH HHS R21 AI095814NIBIB NIH HHS P30 EB009998NIBIB NIH HHS P30-EB-009998NIGMS NIH HHS GM042569NIGMS NIH HHS GM069696NIGMS NIH HHS GM094472NIGMS NIH HHS R01 GM042569NIGMS NIH HHS R01 GM069696NIGMS NIH HHS R01 GM094472
6 · The paper itself

Abstract

Copper resistance has emerged as an important virulence determinant of microbial pathogens. In Streptococcus pneumoniae, copper resistance is mediated by the copper-responsive repressor CopY, CupA and the copper-effluxing P(1B)-type ATPase CopA. We show here that CupA is a previously uncharacterized cell membrane-anchored Cu(I) chaperone and that a Cu(I) binding-competent, membrane-localized CupA is obligatory for copper resistance. The crystal structures of the soluble domain of CupA and the N-terminal metal-binding domain (MBD) of CopA (CopA(MBD)) reveal isostructural cupredoxin-like folds that each harbor a binuclear Cu(I) cluster unprecedented in bacterial copper trafficking. NMR studies reveal unidirectional Cu(I) transfer from the low-affinity site on the soluble domain of CupA to the high-affinity site of CopA(MBD). However, copper binding by CopA(MBD) is not essential for cellular copper resistance, consistent with a primary role of CupA in cytoplasmic Cu(I) sequestration and/or direct delivery to the transmembrane site of CopA for cellular efflux.

Indexed as

Drug Resistance, BacterialBacterial ProteinsBinding SitesCell MembraneCopperCrystallography, X-RayMagnetic Resonance SpectroscopyModels, MolecularMutationProtein Structure, TertiaryStreptococcus pneumoniaeBacterial ProteinsCopA protein, BacteriaCopper

Identifiers

PMID23354287
PMCPMC3578076
OpenAlexW2132193028

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.