Evidence map›Paper›PMID 23354103›Full record

ArticleNature biotechnology2013

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.

Rajeev K Varshney, Chi Song, Rachit K Saxena, Sarwar Azam, Sheng Yu, Andrew G Sharpe, Steven Cannon, Jongmin Baek, Benjamin D Rosen, Bunyamin Tar'an and 39 more

Abstract read
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In one paragraph

Article in Nature biotechnology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 548 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
548citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

548 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Unlocking the future of crop improvement with crop wild relatives.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  6. Article
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  13. A genome-wide association analysis identifies a key candidate gene controlling plant growth habit in chickpea.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  14. Article
  15. Article
  16. Identification and characterization of theFrontiers in plant science · 2026
    Article
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  19. Article
  20. Article

488 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors.

Rajeev K VarshneyInternational Crops Research Institute for the Semi-Arid Tropics, Hyderabad, Andhra Pradesh, India. r.k.varshney@cgiar.org
Chi Song
Rachit K Saxena
Sarwar Azam
Sheng Yu
Andrew G Sharpe
Steven Cannon
Jongmin Baek
Benjamin D Rosen
Bunyamin Tar'an
Teresa Millan
Xudong Zhang
Larissa D Ramsay
Aiko Iwata
Ying Wang
William Nelson
Andrew D Farmer
Pooran M Gaur
Carol Soderlund
R Varma Penmetsa
Chunyan Xu
Arvind K Bharti
Weiming He
Peter Winter
Shancen Zhao
James K Hane
Noelia Carrasquilla-Garcia
Janet A Condie
Hari D Upadhyaya
Ming-Cheng Luo
Mahendar Thudi
C L L Gowda
Narendra P Singh
Judith Lichtenzveig
Krishna K Gali
Josefa Rubio
N Nadarajan
Jaroslav Dolezel
Kailash C Bansal
Xun Xu
David Edwards
Gengyun Zhang
Guenter Kahl
Juan Gil
Karam B Singh
Swapan K Datta
Scott A Jackson
Jun Wang
Douglas R Cook

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chickpea (Cicer arietinum) is the second most widely grown legume crop after soybean, accounting for a substantial proportion of human dietary nitrogen intake and playing a crucial role in food security in developing countries. We report the ∼738-Mb draft whole genome shotgun sequence of CDC Frontier, a kabuli chickpea variety, which contains an estimated 28,269 genes. Resequencing and analysis of 90 cultivated and wild genotypes from ten countries identifies targets of both breeding-associated genetic sweeps and breeding-associated balancing selection. Candidate genes for disease resistance and agronomic traits are highlighted, including traits that distinguish the two main market classes of cultivated chickpea--desi and kabuli. These data comprise a resource for chickpea improvement through molecular breeding and provide insights into both genome diversity and domestication.

Indexed as

AgricultureCicerDisease ResistanceDNAGenetic VariationGenome, PlantGenotypePhylogenyRepetitive Sequences, Nucleic AcidSequence Analysis, DNADNA

Identifiers

PMID23354103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.