Evidence map›Paper›PMID 23352163›Full record

ArticleNeuron2013

Using whole-exome sequencing to identify inherited causes of autism.

Timothy W Yu, Maria H Chahrour, Michael E Coulter, Sarn Jiralerspong, Kazuko Okamura-Ikeda, Bulent Ataman, Klaus Schmitz-Abe, David A Harmin, Mazhar Adli, Athar N Malik and 39 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Neuron, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 248 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
248citing papers in PubMed, 3 pooled it
31.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

248 citing papers in PubMed, 3 syntheses or guidelines pooled it, 457 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Neuro-regulator role of HCommunications biology · 2026
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  9. Sensory and developmental phenotyping ofbioRxiv : the preprint server for biology · 2026
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  10. Article
  11. Article
  12. Review
  13. Autism-Associated Gut Microbiota-DerivedPathogens (Basel, Switzerland) · 2025
    Article
  14. Article
  15. Review
  16. Article
  17. Prosodic Differences in Women with theInternational journal of molecular sciences · 2025
    Article
  18. Review
  19. Article
  20. Review

188 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors at 20 institutions in 9 countries.

Timothy W YuDivision of Genetics, Department of Medicine, Boston Children's Hospital, Boston, MA 02115, USA. timothy.yu@childrens.harvard.edu
Maria H Chahrour
Michael E Coulter
Sarn Jiralerspong
Kazuko Okamura-Ikeda
Bulent Ataman
Klaus Schmitz-Abe
David A Harmin
Mazhar Adli
Athar N Malik
Alissa M D'Gama
Elaine T Lim
Stephan J Sanders
Ganesh H Mochida
Jennifer N Partlow
Christine M Sunu
Jillian M Felie
Jacqueline Rodriguez
Ramzi H Nasir
Janice Ware
Robert M Joseph
R Sean Hill
Benjamin Y Kwan
Muna Al-Saffar
Nahit M Mukaddes
Asif Hashmi
Soher Balkhy
Generoso G Gascon
Fuki M Hisama
Elaine LeClair
Annapurna Poduri
Ozgur Oner
Samira Al-Saad
Sadika A Al-Awadi
Laila Bastaki
Tawfeg Ben-Omran
Ahmad S Teebi
Lihadh Al-Gazali
Valsamma Eapen
Christine R Stevens
Leonard Rappaport
Stacey B Gabriel
Kyriacos Markianos
Matthew W State
Michael E Greenberg
Hisaaki Taniguchi
Nancy E Braverman
Eric M Morrow
Christopher A Walsh
Harvard University · USBoston Children's Hospital · USHoward Hughes Medical Institute · USBroad Institute · USDana-Farber/Boston Children's Cancer and Blood Disorders Center · USKuwait Institute for Medical Specialization · KWTokushima University · JPUnited Arab Emirates University · AEYale University · USArmed Forces Hospital · SAAutism Consortium · USBrown University · USCenter for Human Genetics · USCornell University · USDr Sami Ulus Çocuk Sağlığı ve Hastalıkları Eğitim ve Araştırma Hastanesi · TRIstanbul University · TRKing Faisal Specialist Hospital & Research Centre · SAMassachusetts General Hospital · USMcGill University · CAMontreal Children's Hospital · CA

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
Training in the Molecular Biology of Neurodegeneration and Alzheimer's DiseaseT32AG000222 · NIA · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Bruce A YANKNER · 1992 to 2026
$18.5M
PHD TRAINING IN NEUROSCIENCET32MH020017 · NIMH · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JOHN ASSAD · 1997 to 2026
$15.8M
Neuronal Activity-Dependent Regulation of MeCP2R01NS048276 · NINDS · HARVARD MEDICAL SCHOOL · PI GREENBERG, MICHAEL ELDON · 2004 to 2019
$6.9M
Finding Autism Genes by Genomic Copy Number AnalysisR01MH083565 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI WALSH, CHRISTOPHER A. · 2007 to 2016
$6.9M
Supplement request for Training GrantT32NS007473 · NINDS · CHILDREN'S HOSPITAL BOSTON · PI Elizabeth C. Engle, Thomas L. Schwarz · 1999 to 2026
$6.9M
FUNDAMENTAL NEUROBIOLOGYT32NS007484 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REGEHR, WADE G · 2000 to 2014
$5.9M
Human autism genetics and activity dependent gene activationRC2MH089952 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI WALSH, CHRISTOPHER A. · 2009 to 2010
$5.1M
Genetic investigation of cognitive development in autistic spectrum disorders.K23MH080954 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI MORROW, ERIC M · 2007 to 2011
$920k
Genetics of Familial Epilepsy SyndromesK23NS069784 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI PODURI, ANNAPURNA · 2010 to 2014
$901k
NIA NIH HHS T32 AG000222NICHD NIH HHS P30 HD018655NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32GM07753NIMH NIH HHS 1K23MH080954-01NIMH NIH HHS 1RC2MH089952NIMH NIH HHS K23 MH080954NIMH NIH HHS R01 MH083565NIMH NIH HHS RC2 MH089952NIMH NIH HHS T32 MH020017NINDS NIH HHS K23 NS069784NINDS NIH HHS K23NS069784NINDS NIH HHS R01 NS048276NINDS NIH HHS T32 NS007473NINDS NIH HHS T32 NS007473-12NINDS NIH HHS T32 NS007484NINDS NIH HHS T32 NS007484-08
6 · The paper itself

Abstract

Despite significant heritability of autism spectrum disorders (ASDs), their extreme genetic heterogeneity has proven challenging for gene discovery. Studies of primarily simplex families have implicated de novo copy number changes and point mutations, but are not optimally designed to identify inherited risk alleles. We apply whole-exome sequencing (WES) to ASD families enriched for inherited causes due to consanguinity and find familial ASD associated with biallelic mutations in disease genes (AMT, PEX7, SYNE1, VPS13B, PAH, and POMGNT1). At least some of these genes show biallelic mutations in nonconsanguineous families as well. These mutations are often only partially disabling or present atypically, with patients lacking diagnostic features of the Mendelian disorders with which these genes are classically associated. Our study shows the utility of WES for identifying specific genetic conditions not clinically suspected and the importance of partial loss of gene function in ASDs.

Indexed as

AdolescentAnimalsAutistic DisorderCells, CulturedChildChild, PreschoolCohort StudiesExomeFemaleGenome-Wide Association StudyHumansMalePedigreeRatsSequence Analysis, DNAYoung Adult

Identifiers

PMID23352163
PMCPMC3694430
OpenAlexW2127003470

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.