Evidence map›Paper›PMID 23351336›Full record

ArticleCilia2012

Paramecium BBS genes are key to presence of channels in Cilia.

Megan Smith Valentine, Anbazhagan Rajendran, Junji Yano, S Dilhan Weeraratne, Janine Beisson, Jean Cohen, France Koll, Judith Van Houten

Open access · bronzeAbstract read
In one paragraph

Article in Cilia, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 60 citations in OpenAlex.

  1. Teaching molecular genetics usingJournal of microbiology & biology education · 2025
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  2. Virulence · 2025
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  3. Article
  4. Article
  5. RABL2 promotes the outward transition zone passage of signaling proteins in cilia via ARL3.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. A Review for the Special Issue onMicroorganisms · 2023
    Review
  8. Article
  9. Review
  10. Review
  11. Frontiers in cell and developmental biology · 2022
    Review
  12. Article
  13. UsingGenes · 2021
    Review
  14. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. Article
  17. The role of motile cilia in the development and physiology of the nervous system.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  18. Intraflagellar transport protein RABL5/IFT22 recruits the BBSome to the basal body through the GTPase ARL6/BBS3.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Megan Smith Valentine *Department of Biology, University of Vermont, 109 Carrigan Drive, Burlington, VT, 05405, USA.
Anbazhagan Rajendran *Harvard Medical School and Beth Israel Deaconess Medical Center, Boston, 02215, USA.
Junji YanoDepartment of Biology, University of Vermont, 109 Carrigan Drive, Burlington, VT, 05405, USA.
S Dilhan WeeraratneHarvard Medical School and Children's Hospital, Boston, 02115, USA.
Janine BeissonCenter for Molecular Genetics, National Center for Scientific Research, Génétique Moléculaire, CNRS, Gif-sur-Yvette, 91198, France.
Jean CohenCenter for Molecular Genetics, National Center for Scientific Research, Génétique Moléculaire, CNRS, Gif-sur-Yvette, 91198, France.
France KollCenter for Molecular Genetics, National Center for Scientific Research, Génétique Moléculaire, CNRS, Gif-sur-Yvette, 91198, France.
Judith Van HoutenDepartment of Biology, University of Vermont, 109 Carrigan Drive, Burlington, VT, 05405, USA.
University of Vermont · USCentre de Génétique Moléculaire · FRHarvard University · USUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelled

backgroundChanges in genes coding for ciliary proteins contribute to complex human syndromes called ciliopathies, such as Bardet-Biedl Syndrome (BBS). We used the model organism Paramecium to focus on ciliary ion channels that affect the beat form and sensory function of motile cilia and evaluate the effects of perturbing BBS proteins on these channels.

methodsWe used immunoprecipitations and mass spectrometry to explore whether Paramecium proteins interact as in mammalian cells. We used RNA interference (RNAi) and swimming behavior assays to examine the effects of BBS depletion on ciliary ion channels that control ciliary beating. Combining RNA interference and epitope tagging, we examined the effects of BBS depletion of BBS 7, 8 and 9 on the location of three channels and a chemoreceptor in cilia.

resultsWe found 10 orthologs of 8 BBS genes in P. tetraurelia. BBS1, 2, 4, 5, 7, 8 and 9 co-immunoprecipitate. While RNAi reduction of BBS 7 and 9 gene products caused loss and shortening of cilia, RNAi for all BBS genes except BBS2 affected patterns of ciliary motility that are governed by ciliary ion channels. Swimming behavior assays pointed to loss of ciliary K+ channel function. Combining RNAi and epitope tagged ciliary proteins we demonstrated that a calcium activated K+ channel was no longer located in the cilia upon depletion of BBS 7, 8 or 9, consistent with the cells' swimming behavior. The TRPP channel PKD2 was also lost from the cilia. In contrast, the ciliary voltage gated calcium channel was unaffected by BBS depletion, consistent with behavioral assays. The ciliary location of a chemoreceptor for folate was similarly unperturbed by the depletion of BBS 7, 8 or 9.

conclusionsThe co-immunoprecipitation of BBS 1,2,4,5,7,8, and 9 suggests a complex of BBS proteins. RNAi for BBS 7, 8 or 9 gene products causes the selective loss of K+ and PKD2 channels from the cilia while the critical voltage gated calcium channel and a peripheral receptor protein remain undisturbed. These channels govern ciliary beating and sensory function. Importantly, in P. tetraurelia we can combine studies of ciliopathy protein function with behavior and location and control of ciliary channels.

Identifiers

PMID23351336
PMCPMC3556005
OpenAlexW2133910881

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.