Evidence map›Paper›PMID 23350625›Full record

ReviewAntioxidants & redox signaling2013

Regulation of cell death by transfer RNA.

Ya-Ming Hou, Xiaolu Yang

Abstract readReview
In one paragraph

Review in Antioxidants & redox signaling, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. The Roles of tRNA-Derived Fragments in Cancer: Updates and Perspectives.International journal of molecular sciences · 2025
    Review
  3. RNA modifying enzymes shape tRNA biogenesis and function.The Journal of biological chemistry · 2024
    Review
  4. Article
  5. Review
  6. tRNA cleavage: a new insight.Neural regeneration research · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Transfer RNA and human disease.Frontiers in genetics · 2014
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ya-Ming HouDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, Pennsylvania 19107, USA. ya-ming.hou@jefferson.edu
Xiaolu Yang
Thomas Jefferson University · US

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
REGULATION OF CASPASESR01GM060911 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI YANG, XIAOLU · 2000 to 2013
$2.5M
FUNCTIONS OF tRNA MODIFICATIONSR01GM081601 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING · 2008 to 2011
$1.3M
The mammalian citochondrial codeR21AG042169 · NIA · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING · 2012 to 2013
$416k
Probes for a tRNA modification enzymeR01GM108972 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING · 2014 to 2014
$295k
NCI NIH HHS P30 CA016520NIA NIH HHS AG042169NIGMS NIH HHS GM060911NIGMS NIH HHS GM081601NIGMS NIH HHS R01 GM108972
6 · The paper itself

Abstract

significanceBoth transfer RNA (tRNA) and cytochrome c are essential molecules for the survival of cells. tRNA decodes mRNA codons into amino-acid-building blocks in protein in all organisms, whereas cytochrome c functions in the electron transport chain that powers ATP synthesis in mitochondrion-containing eukaryotes. Additionally, in vertebrates, cytochrome c that is released from mitochondria is a potent inducer of apoptosis, activating apoptotic proteins (caspases) in the cytoplasm to dismantle cells. A better understanding of both tRNA and cytochrome c is essential for an insight into the regulation of cell life and death. RECENT ADVANCES: A recent study showed that the mitochondrion-released cytochrome c can be removed from the cell-death pathway by tRNA molecules. The direct binding of cytochrome c by tRNA provides a mechanism for tRNA to regulate cell death, beyond its role in gene expression. CRITICAL ISSUES: The nature of the tRNA-cytochrome c binding interaction remains unknown. The questions of how this interaction affects tRNA function, cellular metabolism, and apoptotic sensitivity are unanswered. FUTURE DIRECTIONS: Investigations into the critical issues raised above will improve the understanding of tRNA in the fundamental processes of cell death and metabolism. Such knowledge will inform therapies in cell death-related diseases.

Indexed as

ApoptosisAnimalsCaspasesCytochromes cElectron Transport Chain Complex ProteinsEnzyme ActivationGenes, MitochondrialHumansMitochondrial MembranesNeoplasmsNucleic Acid ConformationPermeabilityRNA, TransferCaspasesCytochromes cElectron Transport Chain Complex ProteinsRNA, Transfer

Identifiers

PMID23350625
PMCPMC3717200
OpenAlexW2005403849

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.