Evidence map›Paper›PMID 23349800›Full record

ArticlePloS one2013

Identification of novel protein-protein interactions of Yersinia pestis type III secretion system by yeast two hybrid system.

Huiying Yang, Yafang Tan, Tingting Zhang, Liujun Tang, Jian Wang, Yuehua Ke, Zhaobiao Guo, Xiaoming Yang, Ruifu Yang, Zongmin Du

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
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  8. Review
  9. Article
  10. Yersinia pestis detection by loop-mediated isothermal amplification combined with magnetic bead capture of DNA.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Huiying YangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Yafang Tan
Tingting Zhang
Liujun Tang
Jian Wang
Yuehua Ke
Zhaobiao Guo
Xiaoming Yang
Ruifu Yang
Zongmin Du
Institute of Microbiology · CNBeijing Proteome Research Center · CNSichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type III secretion system (T3SS) of the plague bacterium Y. pestis encodes a syringe-like structure consisting of more than 20 proteins, which can inject virulence effectors into host cells to modulate the cellular functions. Here in this report, interactions among the possible components in T3SS of Yersinia pestis were identified using yeast mating technique. A total of 57 genes, including all the pCD1-encoded genes except those involved in plasmid replication and partition, pseudogenes, and the putative transposase genes, were subjected to yeast mating analysis. 21 pairs of interaction proteins were identified, among which 9 pairs had been previously reported and 12 novel pairs were identified in this study. Six of them were tested by GST pull down assay, and interaction pairs of YscG-SycD, YscG-TyeA, YscI-YscF, and YopN-YpCD1.09c were successfully validated, suggesting that these interactions might play potential roles in function of Yersinia T3SS. Several potential new interactions among T3SS components could help to understand the assembly and regulation of Yersinia T3SS.

Indexed as

Two-Hybrid System TechniquesBacterial Outer Membrane ProteinsBacterial ProteinsCarrier ProteinsGlutathione TransferaseImmunoblottingIntracellular Signaling Peptides and ProteinsMembrane ProteinsMolecular ChaperonesMutationPlasmidsProtein BindingProtein Interaction MappingReproducibility of ResultsSaccharomyces cerevisiaeYersinia pestisBacterial Outer Membrane ProteinsBacterial ProteinsCarrier ProteinsGlutathione TransferaseIntracellular Signaling Peptides and ProteinsMembrane ProteinsMolecular ChaperonesSycD protein, bacteriaTyeA protein, YersiniaYopN protein, YersiniaYscF protein, Yersinia pestisYscG protein, Yersinia

Identifiers

PMID23349800
PMCPMC3551969
OpenAlexW1989798239

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.