Evidence map›Paper›PMID 23349771›Full record

ArticlePloS one2013

Association study of 25 type 2 diabetes related Loci with measures of obesity in Indian sib pairs.

Vipin Gupta, Donipadi Guru Vinay, Ulla Sovio, Sajjad Rafiq, Madamchetty Venkata Kranthi Kumar, Charles Spurgeon Janipalli, David Evans, Kulathu Radha Mani, Madana Narasimha Sandeep, Amy Taylor and 12 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Genomics of body fat distribution.Journal of genetics · 2021
    Review
  7. Article
  8. Review
  9. Article
  10. Genetics of Obesity.Indian journal of clinical biochemistry : IJCB · 2016
    Review
  11. Lack of replication of association of THSD7A with obesity.International journal of obesity (2005) · 2016
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 2 countries.

Vipin GuptaSouth Asia Network for Chronic Disease, Public Health Foundation of India, New Delhi, India. udaiig@gmail.com
Donipadi Guru Vinay
Ulla Sovio
Sajjad Rafiq
Madamchetty Venkata Kranthi Kumar
Charles Spurgeon Janipalli
David Evans
Kulathu Radha Mani
Madana Narasimha Sandeep
Amy Taylor
Sanjay Kinra
Ruth Sullivan
Liza Bowen
Nicholas Timpson
George Davey Smith
Frank Dudbridge
Dorairaj Prabhakaran
Yoav Ben-Shlomo
Kolli Srinath Reddy
Shah Ebrahim
Giriraj Ratan Chandak
Indian Migration Study Group
London School of Hygiene & Tropical Medicine · GBUniversity of Bristol · GBCouncil of Scientific and Industrial Research · INCentre for Cellular and Molecular Biology · INPublic Health Foundation of India · INCentre for Chronic Disease Control · INUniversity of Southampton · GB

Funding

Medical Research Council G1000718Wellcome Trust 083541/Z/07/ZWellcome Trust 084674Wellcome Trust 089645/Z/09/ZWellcome Trust GR070797MF
6 · The paper itself

Abstract

Obesity is an established risk factor for type 2 diabetes (T2D) and they are metabolically related through the mechanism of insulin resistance. In order to explore how common genetic variants associated with T2D correlate with body mass index (BMI), we examined the influence of 25 T2D associated loci on obesity risk. We used 5056 individuals (2528 sib-pairs) recruited in Indian Migration Study and conducted within sib-pair analysis for six obesity phenotypes. We found associations of variants in CXCR4 (rs932206) and HHEX (rs5015480) with higher body mass index (BMI) (β=0.13, p=0.001) and (β=0.09, p=0.002), respectively and weight (β=0.13, p=0.001) and (β=0.09, p=0.001), respectively. CXCR4 variant was also strongly associated with body fat (β=0.10, p=0.0004). In addition, we demonstrated associations of CXCR4 and HHEX with overweight/obesity (OR=1.6, p=0.003) and (OR=1.4, p=0.002), respectively, in 1333 sib-pairs (2666 individuals). We observed marginal evidence of associations between variants at six loci (TCF7L2, NGN3, FOXA2, LOC646279, FLJ39370 and THADA) and waist hip ratio (WHR), BMI and/or overweight which needs to be validated in larger set of samples. All the above findings were independent of daily energy consumption and physical activity level. The risk score estimates based on eight significant loci (including nominal associations) showed associations with WHR and body fat which were independent of BMI. In summary, we establish the role of T2D associated loci in influencing the measures of obesity in Indian population, suggesting common underlying pathophysiology across populations.

Indexed as

Polymorphism, Single NucleotideSiblingsAdultAgedBasic Helix-Loop-Helix ProteinsBody Mass IndexBody WeightDiabetes Mellitus, Type 2FemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHepatocyte Nuclear Factor 3-betaHomeodomain ProteinsHumansIndiaBasic Helix-Loop-Helix ProteinsCXCR4 protein, humanFOXA2 protein, humanHepatocyte Nuclear Factor 3-betaHHEX protein, humanHomeodomain ProteinsNeoplasm ProteinsNerve Tissue ProteinsNEUROG3 protein, humanReceptors, CXCR4TCF7L2 protein, humanTHADA protein, humanTranscription Factor 7-Like 2 ProteinTranscription Factors

Identifiers

PMID23349771
PMCPMC3547960
OpenAlexW2106279462

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.