Evidence map›Paper›PMID 23349739›Full record

ArticlePloS one2013

Characterization of a stable, metronidazole-resistant Clostridium difficile clinical isolate.

Tarah Lynch, Patrick Chong, Jason Zhang, Romeo Hizon, Tim Du, Morag R Graham, Daniel R Beniac, Timothy F Booth, Pamela Kibsey, Mark Miller and 3 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
  2. Article
  3. Clinical microbiology reviews · 2024
    Review
  4. Pathogens (Basel, Switzerland) · 2024
    Review
  5. Article
  6. Antibiotic Resistances of Clostridioides difficile.Advances in experimental medicine and biology · 2024
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Non-ToxigenicAntibiotics (Basel, Switzerland) · 2023
    Article
  12. Platelets promote human macrophages-mediated macropinocytosis ofFrontiers in cellular and infection microbiology · 2023
    Article
  13. Article
  14. Article
  15. Preclinical Data on theAntimicrobial agents and chemotherapy · 2022
    Article
  16. Iron Effects onAntibiotics (Basel, Switzerland) · 2022
    Article
  17. Article
  18. Review
  19. Antimicrobial resistance in Clostridioides difficile.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Review
  20. Mechanisms of antibiotic resistance of Clostridioides difficile.The Journal of antimicrobial chemotherapy · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Tarah LynchNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Patrick Chong
Jason Zhang
Romeo Hizon
Tim Du
Morag R Graham
Daniel R Beniac
Timothy F Booth
Pamela Kibsey
Mark Miller
Denise Gravel
Michael R Mulvey
Canadian Nosocomial Infection Surveillance Program (CNISP)

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundClostridium difficile are gram-positive, spore forming anaerobic bacteria that are the leading cause of healthcare-associated diarrhea, usually associated with antibiotic usage. Metronidazole is currently the first-line treatment for mild to moderate C. difficile diarrhea however recurrence occurs at rates of 15-35%. There are few reports of C. difficile metronidazole resistance in the literature, and when observed, the phenotype has been transient and lost after storage or exposure of the bacteria to freeze/thaw cycles. Owing to the unstable nature of the resistance phenotype in the laboratory, clinical significance and understanding of the resistance mechanisms is lacking. METHODOLOGY/PRINCIPAL

findingsGenotypic and phenotypic characterization was performed on a metronidazole resistant clinical isolate of C. difficile. Whole-genome sequencing was used to identify potential genetic contributions to the phenotypic variation observed with molecular and bacteriological techniques. Phenotypic observations of the metronidazole resistant strain revealed aberrant growth in broth and elongated cell morphology relative to a metronidazole-susceptible, wild type NAP1 strain. Comparative genomic analysis revealed single nucleotide polymorphism (SNP) level variation within genes affecting core metabolic pathways such as electron transport, iron utilization and energy production. CONCLUSIONS/SIGNIFICANCE: This is the first characterization of stable, metronidazole resistance in a C. difficile isolate. The study provides an in-depth genomic and phenotypic analysis of this strain and provides a foundation for future studies to elucidate mechanisms conferring metronidazole resistance in C. difficile that have not been previously described.

Indexed as

Anti-Bacterial AgentsClostridioides difficileDrug Resistance, BacterialDrug Resistance, MultipleGenomicsHumansMetronidazolePhenotypePolymorphism, Single NucleotideAnti-Bacterial AgentsMetronidazole

Identifiers

PMID23349739
PMCPMC3547915

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.