Evidence map›Paper›PMID 23349692›Full record

ArticlePloS one2013

An improved Ras sensor for highly sensitive and quantitative FRET-FLIM imaging.

Ana F Oliveira, Ryohei Yasuda

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  7. Review
  8. Programmable protein circuits in living cells.Science (New York, N.Y.) · 2018
    Article
  9. Article
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  13. Article
  14. Review
  15. Neurofibromin is the major ras inactivator in dendritic spines.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ana F OliveiraDepartment of Neurobiology, Duke University Medical Center, Durham, North Carolina, United States of America.
Ryohei Yasuda

Funding

Mechanisms of Ras Signaling in Single SynapsesR01MH080047 · NIMH · MAX PLANCK FLORIDA CORPORATION · PI YASUDA, RYOHEI · 2007 to 2023
$6.8M
Imaging signal transduction in single dendritic spinesR01NS068410 · NINDS · MAX PLANCK FLORIDA CORPORATION · PI YASUDA, RYOHEI · 2009 to 2013
$2.0M
Howard Hughes Medical InstituteNIMH NIH HHS R01 MH080047NIMH NIH HHS R01MH080047NINDS NIH HHS R01 NS068410NINDS NIH HHS R01NS068410
6 · The paper itself

Abstract

Ras is a signaling protein involved in a variety of cellular processes. Hence, studying Ras signaling with high spatiotemporal resolution is crucial to understanding the roles of Ras in many important cellular functions. Previously, fluorescence lifetime imaging (FLIM) of fluorescent resonance energy transfer (FRET)-based Ras activity sensors, FRas and FRas-F, have been demonstrated to be useful for measuring the spatiotemporal dynamics of Ras signaling in subcellular micro-compartments. However the predominantly nuclear localization of the sensors' acceptor has limited its sensitivity. Here, we have overcome this limitation and developed two variants of the existing FRas sensor with different affinities: FRas2-F (K(d)∼1.7 µM) and FRas2-M (K(d)∼0.5 µM). We demonstrate that, under 2-photon fluorescence lifetime imaging microscopy, FRas2 sensors provide higher sensitivity compared to previous sensors in 293T cells and neurons.

Indexed as

Fluorescence Resonance Energy TransferMicroscopy, Fluorescence, MultiphotonAmino Acid SequenceAnimalsBiosensing TechniquesEnzyme ActivationHEK293 CellsHumansMolecular Sequence DataMutationProtein Structure, TertiaryProto-Oncogene Proteins c-rafras ProteinsRatsRats, Sprague-DawleyProto-Oncogene Proteins c-rafras Proteins

Identifiers

PMID23349692
PMCPMC3544822

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.