Evidence map›Paper›PMID 23349140›Full record

ArticleJournal of experimental botany2013

Translational downregulation of RBCL is operative in the coordinated expression of Rubisco genes in senescent leaves in rice.

Yuji Suzuki, Amane Makino

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  3. International journal of molecular sciences · 2023
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  13. Delayed expression of SAGs correlates with longevity in CMS wheat plants compared to its fertile plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2014
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yuji SuzukiGraduate School of Agricultural Science, Tohoku University, 1-1 Tsutsumidori-Amamiyamachi, Sendai, Japan. ysuzuki@biochem.tohoku.ac.jp
Amane Makino
Tohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rubisco gene expression was examined in detail in rice (Oryza sativa L.) leaves at different positions, i.e. expanding, mature, and senescent leaves. Rubisco small subunit (RBCS) synthesis and RBCS mRNA levels were maximal in expanding leaves and gradually became lower in mature and senescent leaves, with declines in those of the large subunit (RBCL) being relatively slower. The amount of synthesized RBCL per unit level of RBCL mRNA and polysome loading of RBCL mRNA declined in senescent leaves, whereas such phenomena were not observed for RBCS. These results suggested that gene expression of RBCL is downregulated at the level of its translation when a balance between RBCL and RBCS expression is disturbed by leaf senescence. It has been suggested that RBCS protein is a positive regulator for RBCL mRNA level in expanding rice leaves, as judged from their stoichiometric relationship in RBCS transgenic rice plants. However, the ratio of the RBCL mRNA level to the amount of synthesized RBCS in senescent leaves was significantly higher than that in expanding leaves. Therefore, it is suggested that the decline in RBCL mRNA level in senescent leaves is not fully accounted for by that in the amount of synthesized RBCS. Effects of other factors such as the stability of RBCL mRNA may come into play.

Indexed as

Gene Expression Regulation, PlantProtein BiosynthesisCell DeathDown-RegulationGene Expression Regulation, EnzymologicGenes, PlantOryzaPlant LeavesPlants, Genetically ModifiedPolyribosomesRibulose-Bisphosphate CarboxylaseRNA, MessengerRNA, PlantRNA StabilityRbcL protein, plastidRibulose-Bisphosphate CarboxylaseRNA, MessengerRNA, Plant

Identifiers

PMID23349140
PMCPMC3580822
OpenAlexW2171058793

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.