Evidence map›Paper›PMID 23344040›Full record

ArticleInternational journal of molecular sciences2013

The voltage-dependent anion channel 1 (AtVDAC1) negatively regulates plant cold responses during germination and seedling development in Arabidopsis and interacts with calcium sensor CBL1.

Zhi-Yong Li, Zhao-Shi Xu, Guang-Yuan He, Guang-Xiao Yang, Ming Chen, Lian-Cheng Li, Youzhi Ma

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 59 citations in OpenAlex.

  1. Linking redox and calcium signaling via thioredoxins.Journal of experimental botany · 2026
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  9. VDAC1 Negatively Regulates Floral Transition inInternational journal of molecular sciences · 2021
    Article
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  12. Review
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  14. Article
  15. Review
  16. Review
  17. Cells · 2020
    Article
  18. Review
  19. Frontiers in plant science · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Zhi-Yong LiThe Genetic Engineering International Cooperation Base of Chinese Ministry of Science and Technology, Chinese National Center of Plant Gene Research (Wuhan) HUST Part, College of Life Science and Technology, Huazhong University of Science & Technology (HUST), Wuhan 430074, China. xuzhaoshi@yahoo.com.cn.
Zhao-Shi Xu
Guang-Yuan He
Guang-Xiao Yang
Ming Chen
Lian-Cheng Li
Youzhi Ma
Institute of Crop Sciences · CNChinese Academy of Agricultural Sciences · CNHuazhong University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The voltage-dependent anion channel (VDAC), a highly conserved major mitochondrial outer membrane protein, plays crucial roles in energy metabolism and metabolite transport. However, knowledge about the roles of the VDAC family in plants is limited. In this study, we investigated the expression pattern of VDAC1 in Arabidopsis and found that cold stress promoted the accumulation of VDAC1 transcripts in imbibed seeds and mature plants. Overexpression of VDAC1 reduced tolerance to cold stress in Arabidopsis. Phenotype analysis of VDAC1 T-DNA insertion mutant plants indicated that a vdac1 mutant line had faster germination kinetics under cold treatment and showed enhanced tolerance to freezing. The yeast two-hybrid system revealed that VDAC1 interacts with CBL1, a calcium sensor in plants. Like the vdac1, a cbl1 mutant also exhibited a higher seed germination rate. We conclude that both VDAC1 and CBL1 regulate cold stress responses during seed germination and plant development.

Indexed as

Cold TemperatureArabidopsisArabidopsis ProteinsCalcium-Binding ProteinsGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGerminationMutationPlants, Genetically ModifiedProtein BindingReverse Transcriptase Polymerase Chain ReactionSeedlingsSeedsTwo-Hybrid System TechniquesVoltage-Dependent Anion Channel 1Arabidopsis Proteinscalcineurin B-like protein 1, ArabidopsisCalcium-Binding ProteinsVoltage-Dependent Anion Channel 1

Identifiers

PMID23344040
PMCPMC3565290
OpenAlexW2103267896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.