Evidence map›Paper›PMID 23341891›Full record

ArticlePloS one2013

The Type II Hsp40 Sis1 cooperates with Hsp70 and the E3 ligase Ubr1 to promote degradation of terminally misfolded cytosolic protein.

Daniel W Summers, Katie J Wolfe, Hong Yu Ren, Douglas M Cyr

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 80 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. HSP70-binding motifs function as protein quality control degrons.Cellular and molecular life sciences : CMLS · 2023
    Article
  6. Article
  7. Quality control of cytoplasmic proteins inside the nucleus.Computational and structural biotechnology journal · 2022
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genetic Selection Based on a Ste6G3 (Bethesda, Md.) · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Recognition and Degradation of Mislocalized Proteins in Health and Disease.Cold Spring Harbor perspectives in biology · 2019
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniel W SummersDepartment of Cell and Developmental Biology, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Katie J Wolfe
Hong Yu Ren
Douglas M Cyr
University of North Carolina at Chapel Hill · US

Funding

Roles for Hsp70 and Hsp40 in Membrane Protein TriageR01GM056981 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CYR, DOUGLAS M · 1998 to 2019
$6.1M
Hsp40 and Stress ProtectionR01GM067785 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CYR, DOUGLAS M · 2003 to 2011
$2.2M
Suppression of polyQ proteotoxicity by glutamine rich proteinsF31NS074777 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MAYO, KATIE · 2011 to 2012
$58k
Regulation of Amyloid Fibril Assembly by Hsp40 Molecular ChaperonesF31AG032790 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUMMERS, DANIEL W · 2009 to 2010
$56k
NIA NIH HHS 5F31AG032790-02NIA NIH HHS F31 AG032790NIGMS NIH HHS R01 GM056981NIGMS NIH HHS R01 GM067785NINDS NIH HHS 5F31NS074777-02NINDS NIH HHS F31 NS074777
6 · The paper itself

Abstract

Mechanisms for cooperation between the cytosolic Hsp70 system and the ubiquitin proteasome system during protein triage are not clear. Herein, we identify new mechanisms for selection of misfolded cytosolic proteins for degradation via defining functional interactions between specific cytosolic Hsp70/Hsp40 pairs and quality control ubiquitin ligases. These studies revolved around the use of S. cerevisiae to elucidate the degradation pathway of a terminally misfolded reporter protein, short-lived GFP (slGFP). The Type I Hsp40 Ydj1 acts with Hsp70 to suppress slGFP aggregation. In contrast, the Type II Hsp40 Sis1 is required for proteasomal degradation of slGFP. Sis1 and Hsp70 operate sequentially with the quality control E3 ubiquitin ligase Ubr1 to target slGFP for degradation. Compromise of Sis1 or Ubr1 function leads slGFP to accumulate in a Triton X-100-soluble state with slGFP degradation intermediates being concentrated into perinuclear and peripheral puncta. Interestingly, when Sis1 activity is low the slGFP that is concentrated into puncta can be liberated from puncta and subsequently degraded. Conversely, in the absence of Ubr1, slGFP and the puncta that contain slGFP are relatively stable. Ubr1 mediates proteasomal degradation of slGFP that is released from cytosolic protein handling centers. Pathways for proteasomal degradation of misfolded cytosolic proteins involve functional interplay between Type II Hsp40/Hsp70 chaperone pairs, PQC E3 ligases, and storage depots for misfolded proteins.

Indexed as

Protein FoldingProteolysisAdenosine TriphosphatasesAmino Acid SequenceCycloheximideCytosolGreen Fluorescent ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsMolecular Sequence DataProteasome Endopeptidase ComplexProtein StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSubstrate SpecificityUbiquitinAdenosine TriphosphatasesCycloheximideGreen Fluorescent ProteinsHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsProteasome Endopeptidase ComplexSaccharomyces cerevisiae ProteinsSIS1 protein, S cerevisiaeSSA1 protein, S cerevisiaeUbiquitinUbiquitin-Protein LigasesUBR1 protein, S cerevisiae

Identifiers

PMID23341891
PMCPMC3547041
OpenAlexW2019618662

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.