Evidence map›Paper›PMID 23341573›Full record

ArticleCancer research2013

Cooperative activation of tissue-specific genes by pRB and E2F1.

Stephen Flowers, Fuhua Xu, Elizabeth Moran

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  6. The Beige Adipocyte as a Therapy for Metabolic Diseases.International journal of molecular sciences · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Stephen FlowersDepartment of Orthopaedics, New Jersey Medical School-University Hospital Cancer Center, UMDNJ, Newark, NJ 07103, USA.
Fuhua Xu
Elizabeth Moran
Rutgers New Jersey Medical SchoolUniversity Hospital, Newark · US

Funding

SWI/SNF-related complex in osteoblast differentiationR01GM073257 · NIGMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MORAN, ELIZABETH · 2006 to 2009
$1.1M
Interdisciplinary Training Program in Cancer ResearchT32CA134268 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI WHITEHEAD, IAN P · 2010 to 2014
$790k
NCI NIH HHS T32 CA134268NCI NIH HHS T32-CA134268NIGMS NIH HHS R01 GM073257NIGMS NIH HHS R01GM073257
6 · The paper itself

Abstract

The retinoblastoma tumor suppressor protein pRB is conventionally regarded as an inhibitor of the E2F family of transcription factors. Conversely, pRB is also recognized as an activator of tissue-specific gene expression along various lineages including osteoblastogenesis. During osteoblast differentiation, pRB directly targets Alpl and Bglap, which encode the major markers of osteogenesis alkaline phosphatase and osteocalcin. Surprisingly, p130 and repressor E2Fs were recently found to cooccupy and repress Alpl and Bglap in proliferating osteoblast precursors before differentiation. This raises the further question of whether these genes convert to E2F activation targets when differentiation begins, which would constitute a remarkable situation wherein pRB and E2F would be cotargeting genes for activation. Chromatin immunoprecipitation analysis in an osteoblast differentiation model shows that Alpl and Bglap are indeed targeted by an activator E2F, i.e., is E2F1. Promoter occupation of Alpl and Bglap by E2F1 occurs specifically during activation, and depletion of E2F1 severely impairs their induction. Mechanistically, promoter occupation by E2F1 and pRB is mutually dependent, and without this cooperative effect, activation steps previously shown to be dependent on pRB, including recruitment of RNA polymerase II, are impaired. Myocyte- and adipocyte-specific genes are also cotargeted by E2F1 and pRB during differentiation along their respective lineages. The finding that pRB and E2F1 cooperate to activate expression of tissue-specific genes is a paradigm distinct from the classical concept of pRB as an inhibitor of E2F1, but is consistent with the observed roles of these proteins in physiological models.

Indexed as

Cell Differentiation3T3-L1 CellsAdipocytesAnimalsBlotting, WesternCells, CulturedChromatin ImmunoprecipitationE2F1 Transcription FactorMiceMice, Inbred C3HMyoblastsOrgan SpecificityPromoter Regions, GeneticReal-Time Polymerase Chain ReactionRetinoblastoma ProteinReverse Transcriptase Polymerase Chain ReactionE2F1 Transcription FactorRetinoblastoma ProteinRNA, Messenger

Identifiers

PMID23341573
PMCPMC3618574
OpenAlexW2111880539

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.