Evidence map›Paper›PMID 23339190›Full record

ArticleMolecular cancer therapeutics2013

Novel inhibitors of Rad6 ubiquitin conjugating enzyme: design, synthesis, identification, and functional characterization.

Matthew A Sanders, Ghali Brahemi, Pratima Nangia-Makker, Vitaly Balan, Matteo Morelli, Hend Kothayer, Andrew D Westwell, Malathy P V Shekhar

Open access · hybridAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Ubiquitin-conjugating Enzymes in Cancer.International journal of biological sciences · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Small Molecules Targeting Programmed Cell Death in Breast Cancer Cells.International journal of molecular sciences · 2021
    Review
  10. Review
  11. Targeting TRIM Proteins: A Quest towards Drugging an Emerging Protein Class.Chembiochem : a European journal of chemical biology · 2021
    Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Nano-delivery ofMolecular cancer therapeutics · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Matthew A Sanders *Karmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan.
Ghali Brahemi *School of Pharmacy and Pharmaceutical Sciences, Cardiff University, Wales, UK.
Pratima Nangia-MakkerKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan.
Vitaly BalanKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan.
Matteo MorelliSchool of Pharmacy and Pharmaceutical Sciences, Cardiff University, Wales, UK.
Hend KothayerSchool of Pharmacy and Pharmaceutical Sciences, Cardiff University, Wales, UK.
Andrew D WestwellSchool of Pharmacy and Pharmaceutical Sciences, Cardiff University, Wales, UK.
Malathy P V ShekharKarmanos Cancer Institute, Wayne State University School of Medicine, Detroit, Michigan.
Cardiff University · GBZagazig University · EGThe Barbara Ann Karmanos Cancer Institute · US

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI PAUL M STEMMER · 1985 to 2026
$68.4M
The BCA2 Ubiquitin E3 Ligase as a Target in Breast CancerR01CA127258 · NCI · WAYNE STATE UNIVERSITY · PI DOU, QING PING · 2007 to 2011
$1.2M
NCI NIH HHS P30 CA022453NCI NIH HHS R01 CA127258NCI NIH HHS R01CA127258-04
6 · The paper itself

Abstract

Protein ubiquitination is important for cell signaling, DNA repair, and proteasomal degradation, and it is not surprising that alterations in ubiquitination occur frequently in cancer. Ubiquitin-conjugating enzymes (E2) mediate ubiquitination by selective interactions with ubiquitin-activating (E1) and ubiquitin ligase (E3) enzymes, and thus selective E2 small molecule inhibitor (SMI) will provide specificity unattainable with proteasome inhibitors. Here we describe synthesis and functional characterization of the first SMIs of human E2 Rad6B, a fundamental component of translesion synthesis DNA repair. A pharmacophore model for consensus E2 ubiquitin-binding sites was generated for virtual screening to identify E2 inhibitor candidates. Twelve triazine (TZ) analogs screened in silico by molecular docking to the Rad6B X-ray structure were verified by their effect on Rad6B ubiquitination of histone H2A. TZs #8 and 9 docked to the Rad6B catalytic site with highest complementarity. TZs #1, 2, 8, and 9 inhibited Rad6B-ubiquitin thioester formation and subsequent ubiquitin transfer to histone H2A. SMI #9 inhibition of Rad6 was selective as BCA2 ubiquitination by E2 UbcH5 was unaffected by SMI #9. SMI #9 more potently inhibited proliferation, colony formation, and migration than SMI #8, and induced MDA-MB-231 breast cancer cell G2-M arrest and apoptosis. Ubiquitination assays using Rad6 immunoprecipitated from SMI #8- or 9-treated cells confirmed inhibition of endogenous Rad6 activity. Consistent with our previous data showing Rad6B-mediated polyubiquitination stabilizes β-catenin, MDA-MB-231 treatment with SMIs #8 or 9 decreased β-catenin protein levels. Together these results describe identification of the first Rad6 SMIs.

Indexed as

Base Sequencebeta CateninCell CycleCell Line, TumorCell MovementCell ProliferationCell SurvivalConserved SequenceDrug DesignEnzyme InhibitorsHumansMolecular ConformationMolecular Docking SimulationMolecular Sequence DataTriazinesUbiquitin-Conjugating Enzymesbeta CateninEnzyme InhibitorsTriazinesUBE2B protein, humanUbiquitin-Conjugating Enzymes

Identifiers

PMID23339190
PMCPMC3840907
OpenAlexW2165700739

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.