ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2013
De novo next-generation sequencing, assembling and annotation of Arachis hypogaea L. Spanish botanical type whole plant transcriptome.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Comparative transcriptome analysis of genes involved in the drought stress response of two peanut (Arachis hypogaea L.) varieties.BMC plant biology · 2021Article
- Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume.Scientific reports · 2016Article
- Transcriptome-wide identification of the genes responding to replanting disease in Rehmannia glutinosa L. roots.Molecular biology reports · 2015Article
- Root Transcriptome Analysis of Wild Peanut Reveals Candidate Genes for Nematode Resistance.PloS one · 2015Article
- Article
- Comparative and evolutionary analysis of major peanut allergen gene families.Genome biology and evolution · 2014Article
- Transcriptome analysis of salt tolerant common bean (Phaseolus vulgaris L.) under saline conditions.PloS one · 2014Article
- Transcriptome Profiling of WildPlant molecular biology reporterArticle
Corrections and comments
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Authors and funding
12 authors.
Funding
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Abstract
Peanut is a major agronomic crop within the legume family and an important source of plant oil, proteins, vitamins, and minerals for human consumption, as well as animal feed, bioenergy, and health products. Peanut genomic research effort lags that of other legumes of economic importance, mainly due to the shortage of essential genomic infrastructure, tools, resources, and the complexity of the peanut genome. This is a pioneering study that explored the peanut Spanish Group whole plant transcriptome and culminated in developing unigenes database. The study applied modern technologies, such as, normalization and next-generation sequencing. It overall sequenced 8,308,655,800 nucleotides and generated 26,048 unigenes amongst which 12,302 were annotated and 8,817 were characterized. The remainder, 13,746 (52.77 %) unigenes, had unknown functions. These results will be applied as the reference transcriptome sequences for expanded transcriptome sequencing of the remaining three peanut botanical types (Valencia, Runner, and Virginia), which is currently in progress, RNA-seq, exome identification, and genomic markers development. It will also provide important tools and resources for other legumes and plant species genomic research.
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