Evidence map›Paper›PMID 23335587›Full record

ArticleMicrobiologyOpen2013

The anguibactin biosynthesis and transport genes are encoded in the chromosome of Vibrio harveyi: a possible evolutionary origin for the pJM1 plasmid-encoded system of Vibrio anguillarum?

Hiroaki Naka, Luis A Actis, Jorge H Crosa

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Quorum sensing and iron regulate a two-for-one siderophore gene cluster inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Article
  8. Iron Acquisition Strategies ofFrontiers in cellular and infection microbiology · 2017
    Review
  9. Vibrio Iron Transport: Evolutionary Adaptation to Life in Multiple Environments.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  10. Plasmid- and chromosome-encoded siderophore anguibactin systems found in marine vibrios: biosynthesis, transport and evolution.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hiroaki NakaDepartment of Molecular Microbiology and Immunology, Oregon Health and Science University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA. nakah@ohsu.edu
Luis A Actis
Jorge H Crosa
Oregon Health & Science University · USMiami University · US

Funding

Assembly Line Biosynthesis of Bacterial SiderophoresR01GM064600 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI HEFFRON, FRED L · 2002 to 2012
$2.6M
Study of iron acquisition in Acinetobacter baumanniiR01AI070174 · NIAID · MIAMI UNIVERSITY OXFORD · PI ACTIS, LUIS A · 2007 to 2011
$1.4M
NIAID NIH HHS AI070174NIAID NIH HHS R01 AI070174NIGMS NIH HHS GM64600NIGMS NIH HHS R01 GM064600
6 · The paper itself

Abstract

Many Vibrio anguillarum serotype O1 strains carry 65-kb pJM1-type plasmids harboring genes involved in siderophore anguibactin biosynthesis and transport. The anguibactin system is an essential factor for V. anguillarum to survive under iron-limiting conditions, and as a consequence, it is a very important virulence factor of this bacterium. Our comparative analysis of genomic data identified a cluster harboring homologs of anguibactin biosynthesis and transport genes in the chromosome of Vibrio harveyi. We have purified the putative anguibactin siderophore and demonstrated that it is indeed anguibactin by mass spectrometry and specific bioassays. Furthermore, we characterized two genes, angR and fatA, in this chromosome cluster that, respectively, participate in anguibactin biosynthesis and transport as determined by mutagenesis analysis. Furthermore, we found that the V. harveyi FatA protein is located in the outer membrane fractions as previously demonstrated in V. anguillarum. Based on our data, we propose that the anguibactin biosynthesis and transport cluster in the V. anguillarum pJM1 plasmid have likely evolved from the chromosome cluster of V. harveyi or vice versa.

Indexed as

Chromosomes, BacterialEvolution, MolecularGenes, BacterialPlasmidsBiosynthetic PathwaysDNA Mutational AnalysisMass SpectrometryMultigene FamilyPeptidesVibrioanguibactinPeptides

Identifiers

PMID23335587
PMCPMC3584223
OpenAlexW2026900756

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.