Evidence map›Paper›PMID 23334789›Full record

ArticleNature immunology2013

Mutual expression of the transcription factors Runx3 and ThPOK regulates intestinal CD4⁺ T cell immunity.

Bernardo Sgarbi Reis, Aneta Rogoz, Frederico Azevedo Costa-Pinto, Ichiro Taniuchi, Daniel Mucida

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 182 papers.

0numbers the graph read from it
0cells of the map it votes in
182citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

182 citing papers in PubMed, 276 citations in OpenAlex.

  1. Trial
  2. Double Positive CD4Frontiers in immunology · 2019
    Trial
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Cytotoxic CD4Signal transduction and targeted therapy · 2026
    Review
  9. Review
  10. CD3Scientific reports · 2026
    Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Cytotoxic T Cells: Kill, Memorize, and Mask to Maintain Immune Homeostasis.International journal of molecular sciences · 2025
    Review
  18. Article
  19. Review
  20. Article

122 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Bernardo Sgarbi ReisLaboratory of Mucosal Immunology, The Rockefeller University, New York, New York, USA.
Aneta Rogoz
Frederico Azevedo Costa-Pinto
Ichiro Taniuchi
Daniel Mucida
Rockefeller University · USRIKEN Center for Integrative Medical Sciences · JP

Funding

INTESTINAL REGULATION OF ThPOK EXPRESSION AND CD4 HELPER T CELL FUNCTIONR01DK093674 · NIDDK · ROCKEFELLER UNIVERSITY · PI Daniel S Mucida · 2013 to 2026
$7.0M
NIDDK NIH HHS R01 DK093674NIDDK NIH HHS R01 DK093674-01
6 · The paper itself

Abstract

The gut mucosa hosts large numbers of activated lymphocytes that are exposed to stimuli from the diet, microbiota and pathogens. Although CD4(+) T cells are crucial for defense, intestinal homeostasis precludes exaggerated responses to luminal contents, whether they are harmful or not. We investigated mechanisms used by CD4(+) T cells to avoid excessive activation in the intestine. Using genetic tools to label and interfere with T cell-development transcription factors, we found that CD4(+) T cells acquired the CD8-lineage transcription factor Runx3 and lost the CD4-lineage transcription factor ThPOK and their differentiation into the T(H)17 subset of helper T cells and colitogenic potential, in a manner dependent on transforming growth factor-β (TGF-β) and retinoic acid. Our results demonstrate considerable plasticity in the CD4(+) T cell lineage that allows chronic exposure to luminal antigens without pathological inflammation.

Indexed as

AnimalsCD4-Positive T-LymphocytesCD8 AntigensCell DifferentiationCells, CulturedCitrobacter rodentiumColitisCore Binding Factor Alpha 3 SubunitEnterobacteriaceae InfectionsHomeodomain ProteinsInflammationIntestinal MucosaIntestinesLymphocyte ActivationMiceMice, Inbred C57BLCD8 AntigensCore Binding Factor Alpha 3 SubunitHomeodomain ProteinsRAG-1 proteinRunx3 protein, mouseTamoxifenTranscription FactorsTransforming Growth Factor betaTretinoinZbtb7b protein, mouse

Identifiers

PMID23334789
PMCPMC3804366
OpenAlexW2003460362

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.