Evidence map›Paper›PMID 23333867›Full record

ReviewNucleus (Austin, Tex.)

Functional sub-division of the Drosophila genome via chromatin looping: the emerging importance of CP190.

Sajad H Ahanger, Yogesh S Shouche, Rakesh K Mishra

Open access · goldAbstract readReview
In one paragraph

Review in Nucleus (Austin, Tex.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. The N-Terminal Part ofInternational journal of molecular sciences · 2023
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  4. Article
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  6. Human CTCF Interacts with Drosophila CP190, but not with Kaiso.Doklady. Biochemistry and biophysics · 2021
    Article
  7. Article
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  13. Review
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  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sajad H AhangerNational Centre for Cell Science, Pune, India. sajad@ccmb.res.in
Yogesh S Shouche
Rakesh K Mishra
Centre for Cellular and Molecular Biology · INNational Centre for Cell Science · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Insulators help in organizing the eukaryotic genomes into physically and functionally autonomous regions through the formation of chromatin loops. Recent findings in Drosophila and vertebrates suggest that insulators anchor multiple loci through long-distance interactions which may be mechanistically linked to insulator function. Important to such processes in Drosophila is CP190, a common co-factor of insulator complexes. CP190 is also known to associate with the nuclear matrix, components of the RNAi machinery, active promoters and borders of the repressive chromatin domains. Although CP190 plays a pivotal role in insulator function in Drosophila, vertebrates lack a probable functional equivalent of CP190 and employ CTCF as the major factor to carry out insulator function/chromatin looping. In this review, we discuss the emerging role of CP190 in tethering genome, specifically in the perspective of insulator function in Drosophila. Future studies aiming genome-wide role of CP190 in chromatin looping is likely to give important insights into the mechanism of genome organization.

Indexed as

AnimalsCCCTC-Binding FactorChromatinDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGenome, InsectHumansInsulator ElementsMicrotubule-Associated ProteinsNuclear ProteinsRepressor ProteinsCCCTC-Binding FactorChromatinCP190 protein, DrosophilaCTCF protein, humanDNA-Binding ProteinsDrosophila ProteinsMicrotubule-Associated ProteinsNuclear ProteinsRepressor Proteinschromatin organizationCP190Insulatorslong-range interactions

Identifiers

PMID23333867
PMCPMC3621743
OpenAlexW2006669822

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.