Evidence map›Paper›PMID 23332748›Full record

ArticleCell2013

Developmentally regulated subnuclear genome reorganization restricts neural progenitor competence in Drosophila.

Minoree Kohwi, Joshua R Lupton, Sen-Lin Lai, Michael R Miller, Chris Q Doe

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 172 citations in OpenAlex.

  1. Article
  2. Asymmetric centromere and gene locus positioning inbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. A nuclear architecture screen inGenes & development · 2024
    Article
  11. Article
  12. Article
  13. A nuclear architecture screen inbioRxiv : the preprint server for biology · 2023
    Article
  14. Temporal regulation of neural diversity in Drosophila and vertebrates.Seminars in cell & developmental biology · 2023
    Review
  15. Direct neuronal reprogramming by temporal identity factors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  16. Nuclear architecture and the structural basis of mitotic memory.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Review
  17. Review
  18. Article
  19. Article
  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Minoree KohwiInstitute of Neuroscience, Institute of Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene, OR 97403, USA.
Joshua R Lupton
Sen-Lin Lai
Michael R Miller
Chris Q Doe
University of Oregon · USHoward Hughes Medical Institute · US

Funding

GENETIC AND MOLECULAR STUDIES OF NEUROGENESISR01HD027056 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe · 1989 to 2026
$5.0M
Genetic and Molecular Studies of NeurogenesisR37HD027056 · NICHD · UNIVERSITY OF OREGON · PI DOE, CHRIS Q · 2012 to 2021
$3.0M
Mechanisms underlying loss of neural stem cell competence.R00HD072035 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOHWI, MINOREE · 2014 to 2016
$735k
MOLECULAR GENETIC ANALYSIS OF ASYMMETRIC CELL DIVISIONSR01GM058899 · NIGMS · UNIVERSITY OF OREGON · PI DOE, CHRIS Q · 1999 to 2002
$456k
Mechanisms underlying loss of neural stem cell competence.K99HD072035 · NICHD · UNIVERSITY OF OREGON · PI KOHWI, MINOREE · 2012 to 2013
$221k
Howard Hughes Medical InstituteNICHD NIH HHS HD072035NICHD NIH HHS HD27056NICHD NIH HHS K99 HD072035NICHD NIH HHS R00 HD072035NICHD NIH HHS R01 HD027056NICHD NIH HHS R37 HD027056NIGMS NIH HHS R01 GM058899
6 · The paper itself

Abstract

Stem and/or progenitor cells often generate distinct cell types in a stereotyped birth order and over time lose competence to specify earlier-born fates by unknown mechanisms. In Drosophila, the Hunchback transcription factor acts in neural progenitors (neuroblasts) to specify early-born neurons, in part by indirectly inducing the neuronal transcription of its target genes, including the hunchback gene. We used in vivo immuno-DNA FISH and found that the hunchback gene moves to the neuroblast nuclear periphery, a repressive subnuclear compartment, precisely when competence to specify early-born fate is lost and several hours and cell divisions after termination of its transcription. hunchback movement to the lamina correlated with downregulation of the neuroblast nuclear protein, Distal antenna (Dan). Either prolonging Dan expression or disrupting lamina interfered with hunchback repositioning and extended neuroblast competence. We propose that neuroblasts undergo a developmentally regulated subnuclear genome reorganization to permanently silence Hunchback target genes that results in loss of progenitor competence.

Indexed as

Gene Expression Regulation, DevelopmentalGenome, InsectAnimalsDNA-Binding ProteinsDrosophilaDrosophila ProteinsNeural Stem CellsNeuronsNuclear ProteinsTranscription Factorsdan protein, DrosophilaDNA-Binding ProteinsDrosophila Proteinshb protein, DrosophilaNuclear ProteinsTranscription Factors

Identifiers

PMID23332748
PMCPMC3670710
OpenAlexW2149670621

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.