Evidence map›Paper›PMID 23332075›Full record

ArticleBiophysical journal2013

Breaking the radiation damage limit with Cryo-SAXS.

Steve P Meisburger, Matthew Warkentin, Huimin Chen, Jesse B Hopkins, Richard E Gillilan, Lois Pollack, Robert E Thorne

Abstract read
In one paragraph

Article in Biophysical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Predicting data quality in biological X-ray solution scattering.Acta crystallographica. Section D, Structural biology · 2018
    Review
  12. Article
  13. Article
  14. Measuring the Densities of Aqueous Glasses at Cryogenic Temperatures.Journal of visualized experiments : JoVE · 2017
    Article
  15. Article
  16. Article
  17. Improved radiation dose efficiency in solution SAXS using a sheath flow sample environment.Acta crystallographica. Section D, Structural biology · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Steve P MeisburgerSchool of Applied and Engineering Physics, Cornell University, Ithaca, New York, USA.
Matthew Warkentin
Huimin Chen
Jesse B Hopkins
Richard E Gillilan
Lois Pollack
Robert E Thorne

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
RNA folding: from global structure to atomic detailR01GM085062 · NIGMS · CORNELL UNIVERSITY · PI ELBER, RON, POLLACK, LOIS · 2009 to 2017
$2.7M
New Approaches to Radiation Damage and CryoprotectionR01GM065981 · NIGMS · CORNELL UNIVERSITY ITHACA · PI THORNE, ROBERT E. · 2002 to 2010
$1.8M
NIGMS NIH HHS GM-103485NIGMS NIH HHS P41 GM103485NIGMS NIH HHS R01 GM065981NIGMS NIH HHS R01 GM085062NIGMS NIH HHS R01-GM085062NIGMS NIH HHS R01 GM65981
6 · The paper itself

Abstract

Small angle x-ray scattering (SAXS) is a versatile and widely used technique for obtaining low-resolution structures of macromolecules and complexes. SAXS experiments measure molecules in solution, without the need for labeling or crystallization. However, radiation damage currently limits the application of SAXS to molecules that can be produced in microgram quantities; for typical proteins, 10-20 μL of solution at 1 mg/mL is required to accumulate adequate signal before irreversible x-ray damage is observed. Here, we show that cryocooled proteins and nucleic acids can withstand doses at least two orders of magnitude larger than room temperature samples. We demonstrate accurate T = 100 K particle envelope reconstructions from sample volumes as small as 15 nL, a factor of 1000 smaller than in current practice. Cryo-SAXS will thus enable structure determination of difficult-to-express proteins and biologically important, highly radiation-sensitive proteins including light-activated switches and metalloenzymes.

Indexed as

Cold TemperatureScattering, Small AngleX-Ray DiffractionAldose-Ketose IsomerasesAnimalsBuffersChickensCryoprotective AgentsDose-Response Relationship, RadiationPolyethylene GlycolsSolutionsVitrificationAldose-Ketose IsomerasesBuffersCryoprotective AgentsPolyethylene GlycolsSolutionsxylose isomerase

Identifiers

PMID23332075
PMCPMC3540250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.