Evidence map›Paper›PMID 23327930›Full record

ArticleAutophagy2013

ATG5 regulates plasma cell differentiation.

Kara L Conway, Petric Kuballa, Bernard Khor, Mei Zhang, Hai Ning Shi, Herbert W Virgin, Ramnik J Xavier

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 1 pooled it
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 1 synthesis or guideline pooled it, 143 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Why are long-lived plasma cells long-lived?Frontiers in immunology · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Autophagy-related mechanisms for treatment of multiple myeloma.Cancer drug resistance (Alhambra, Calif.) · 2023
    Review
  15. Article
  16. The Role of XBP1 in bone metabolism.Frontiers in endocrinology · 2023
    Review
  17. Article
  18. Article
  19. Review
  20. Review

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Kara L ConwayGastrointestinal Unit and Center for the Study of Inflammatory Bowel Disease, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Petric Kuballa
Bernard Khor
Mei Zhang
Hai Ning Shi
Herbert W Virgin
Ramnik J Xavier
Harvard University · USCenter for Systems Biology · USWashington University in St. Louis · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
ROLE OF DIETARY CONSTITUENTS ON GENE EXPRESSION IN INTESTINAL EPITHELIUMP30DK040561 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI CHRISTOPHER P DUGGAN · 1994 to 2026
$31.6M
Toll-like Receptors and the Intestinal EpitheliumR01DK060049 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI XAVIER, RAMNIK J · 2002 to 2011
$3.5M
Systems Biology of Crohn's DiseaseR01DK083756 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI DALY, MARK JOSEPH, XAVIER, RAMNIK J · 2008 to 2011
$1.5M
Genetics, Genes, and Pathways in Inflammatory Bowel Disease (IBD)RC1DK086502 · NIDDK · BROAD INSTITUTE, INC. · PI DALY, MARK JOSEPH, XAVIER, RAMNIK J · 2009 to 2010
$998k
NIDDK NIH HHS DK043351NIDDK NIH HHS DK060049NIDDK NIH HHS DK083756NIDDK NIH HHS DK086502NIDDK NIH HHS P30 DK040561NIDDK NIH HHS P30 DK043351NIDDK NIH HHS R01 DK060049NIDDK NIH HHS R01 DK083756NIDDK NIH HHS RC1 DK086502
6 · The paper itself

Abstract

Autophagy is a conserved homeostatic process in which cytoplasmic contents are degraded and recycled. Two ubiquitin-like conjugation pathways are required for the generation of autophagosomes, and ATG5 is necessary for both of these processes. Studies of mice deficient in ATG5 reveal a key role for autophagy in T lymphocyte function, as well as in B cell development and B-1a B cell maintenance. However, the role of autophagy genes in B cell function and antibody production has not been described. Using mice in which Atg5 is conditionally deleted in B lymphocytes, we showed here that this autophagy gene is essential for plasma cell homeostasis. In the absence of B cell ATG5 expression, antibody responses were significantly diminished during antigen-specific immunization, parasitic infection and mucosal inflammation. Atg5-deficient B cells maintained the ability to produce immunoglobulin and undergo class-switch recombination, yet had impaired SDC1 expression, significantly decreased antibody secretion in response to toll-like receptor ligands, and an inability to upregulate plasma cell transcription factors. These results build upon previous data demonstrating a role for ATG5 in early B cell development, illustrating its importance in late B cell activation and subsequent plasma cell differentiation.

Indexed as

AnimalsAntibody FormationAntigensAutophagy-Related Protein 5Cell DifferentiationEpitopesImmunoglobulin Class SwitchingIntestinesLymphocyte CountLymphoid TissueMiceMice, KnockoutMicrotubule-Associated ProteinsNematospiroides dubiusPeritoneumPlasma CellsAntigensAtg5 protein, mouseAutophagy-Related Protein 5EpitopesMicrotubule-Associated Proteinsantibody secretionATG5B lymphocytesimmunityplasma cell differentiation

Identifiers

PMID23327930
PMCPMC3627668
OpenAlexW2130314992

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.