Evidence map›Paper›PMID 23326376›Full record

ArticlePloS one2013

Metagenomic analyses of alcohol induced pathogenic alterations in the intestinal microbiome and the effect of Lactobacillus rhamnosus GG treatment.

Lara Bull-Otterson, Wenke Feng, Irina Kirpich, Yuhua Wang, Xiang Qin, Yanlong Liu, Leila Gobejishvili, Swati Joshi-Barve, Tulin Ayvaz, Joseph Petrosino and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 320 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
320citing papers in PubMed, 5 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

320 citing papers in PubMed, 5 syntheses or guidelines pooled it, 530 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Trial
  7. Trial
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Protective effects ofFrontiers in pharmacology · 2026
    Article
  16. Article
  17. Lipid Droplet Dynamics in Alcoholic Steatohepatitis.The American journal of pathology · 2026
    Review
  18. Review
  19. Article
  20. Gut microbes · 2025
    Article

260 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Lara Bull-OttersonDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA.
Wenke Feng
Irina Kirpich
Yuhua Wang
Xiang Qin
Yanlong Liu
Leila Gobejishvili
Swati Joshi-Barve
Tulin Ayvaz
Joseph Petrosino
Maiying Kong
David Barker
Craig McClain
Shirish Barve
University of Louisville · USBaylor College of Medicine · US

Funding

Tumor Necrosis Factor and Alcoholic Liver DiseaseR37AA010762 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2001 to 2010
$3.6M
S-adenosylhomocysteine and S-adenosylmethionine in Alcoholic Liver DiseaseR01AA015970 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2005 to 2010
$2.0M
The Role of Alcohol in HIV Therapy HepatotoxicityR01AA018016 · NIAAA · UNIVERSITY OF LOUISVILLE · PI BARVE, SHIRISH S, EATON, JOHN W · 2008 to 2012
$1.7M
Cyclic AMP, Cytokine Modulation and Alcoholic Liver DiseaseR01AA018869 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2009 to 2013
$1.7M
Biomarkers for SteatohepatitisRC2AA019385 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2009 to 2010
$1.6M
Mechanisms of Alcohol-Induced ImmunosuppressionR01AA014371 · NIAAA · UNIVERSITY OF LOUISVILLE · PI BARVE, SHIRISH S · 2004 to 2010
$1.6M
Novel therapies in alcoholic hepatitis University of LouisvilleU01AA021901 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2012 to 2017
$1.5M
Mechanisms of S-adenosylmethionine in NASHR01DK071765 · NIDDK · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2005 to 2009
$1.5M
Alcohol Liver Disease and Alcohol-Nutrient InteractionsP01AA017103 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2008 to 2010
$1.3M
University of Louisville Bioinformatics Faculty Recruitment for EpigeneticsP30AA019360 · NIAAA · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2009 to 2010
$811k
Dietary Fat in Ethanol-Induced Intestinal Barrier Dysfunction in ALDR21AA020849 · NIAAA · UNIVERSITY OF LOUISVILLE · PI KIRPICH, IRINA A. · 2012 to 2013
$381k
Probiotics and HIF signaling in Alcoholic Liver DiseaseR21AA020848 · NIAAA · UNIVERSITY OF LOUISVILLE · PI FENG, WENKE · 2013 to 2014
$376k
NIAAA NIH HHS P01 AA017103NIAAA NIH HHS P30 AA019360NIAAA NIH HHS R01 AA0015970NIAAA NIH HHS R01 AA014371NIAAA NIH HHS R01 AA015970NIAAA NIH HHS R01 AA018016NIAAA NIH HHS R01 AA018869NIAAA NIH HHS R21 AA020848NIAAA NIH HHS R21 AA020849NIAAA NIH HHS R37 AA010762NIAAA NIH HHS RC2 AA019385NIAAA NIH HHS RC2AA019385NIAAA NIH HHS U01 AA021901NIDDK NIH HHS R01 DK071765PHS HHS R01 AAO14371
6 · The paper itself

Abstract

Enteric dysbiosis plays an essential role in the pathogenesis of alcoholic liver disease (ALD). Detailed characterization of the alterations in the gut microbiome is needed for understanding their pathogenic role in ALD and developing effective therapeutic approaches using probiotic supplementation. Mice were fed liquid Lieber-DeCarli diet without or with alcohol (5% v/v) for 6 weeks. A subset of mice were administered the probiotic Lactobacillus rhamnosus GG (LGG) from 6 to 8 weeks. Indicators of intestinal permeability, hepatic steatosis, inflammation and injury were evaluated. Metagenomic analysis of the gut microbiome was performed by analyzing the fecal DNA by amplification of the V3-V5 regions of the 16S rRNA gene and large-scale parallel pyrosequencing on the 454 FLX Titanium platform. Chronic ethanol feeding caused a decline in the abundance of both Bacteriodetes and Firmicutes phyla, with a proportional increase in the gram negative Proteobacteria and gram positive Actinobacteria phyla; the bacterial genera that showed the biggest expansion were the gram negative alkaline tolerant Alcaligenes and gram positive Corynebacterium. Commensurate with the qualitative and quantitative alterations in the microbiome, ethanol caused an increase in plasma endotoxin, fecal pH, hepatic inflammation and injury. Notably, the ethanol-induced pathogenic changes in the microbiome and the liver were prevented by LGG supplementation. Overall, significant alterations in the gut microbiome over time occur in response to chronic alcohol exposure and correspond to increases in intestinal barrier dysfunction and development of ALD. Moreover, the altered bacterial communities of the gut may serve as significant therapeutic target for the prevention/treatment of chronic alcohol intake induced intestinal barrier dysfunction and liver disease.

Indexed as

AnimalsAnti-Infective Agents, LocalBacteriaBiodiversityClaudin-1EthanolFecesGene ExpressionGenetic VariationHydrogen-Ion ConcentrationIntestinal MucosaIntestinesLacticaseibacillus rhamnosusLiver Diseases, AlcoholicMaleMetagenomeAnti-Infective Agents, LocalClaudin-1EthanolRNA, Ribosomal, 16STjp1 protein, mouseZonula Occludens-1 Protein

Identifiers

PMID23326376
PMCPMC3541399
OpenAlexW2053661184

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.