Evidence map›Paper›PMID 23325853›Full record

ArticleNucleic acids research2013

Nap1 regulates proper CENP-B binding to nucleosomes.

Hiroaki Tachiwana, Yuta Miya, Nobuaki Shono, Jun-ichirou Ohzeki, Akihisa Osakabe, Koichiro Otake, Vladimir Larionov, William C Earnshaw, Hiroshi Kimura, Hiroshi Masumoto and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Hiroaki TachiwanaLaboratory of Structural Biology, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo 162-8480, Japan.
Yuta Miya
Nobuaki Shono
Jun-ichirou Ohzeki
Akihisa Osakabe
Koichiro Otake
Vladimir Larionov
William C Earnshaw
Hiroshi Kimura
Hiroshi Masumoto
Hitoshi Kurumizaka
Nagoya University · JPWaseda University · JPKazusa DNA Research Institute · JP

Funding

Intramural NIH HHSWellcome Trust 073915Wellcome Trust 077707Wellcome Trust 092076
6 · The paper itself

Abstract

CENP-B is a widely conserved centromeric satellite DNA-binding protein, which specifically binds to a 17-bp DNA sequence known as the CENP-B box. CENP-B functions positively in the de novo assembly of centromeric nucleosomes, containing the centromere-specific histone H3 variant, CENP-A. At the same time, CENP-B also prevents undesired assembly of the CENP-A nucleosome through heterochromatin formation on satellite DNA integrated into ectopic sites. Therefore, improper CENP-B binding to chromosomes could be harmful. However, no CENP-B eviction mechanism has yet been reported. In the present study, we found that human Nap1, an acidic histone chaperone, inhibited the non-specific binding of CENP-B to nucleosomes and apparently stimulated CENP-B binding to its cognate CENP-B box DNA in nucleosomes. In human cells, the CENP-B eviction activity of Nap1 was confirmed in model experiments, in which the CENP-B binding to a human artificial chromosome or an ectopic chromosome locus bearing CENP-B boxes was significantly decreased when Nap1 was tethered near the CENP-B box sequence. In contrast, another acidic histone chaperone, sNASP, did not promote CENP-B eviction in vitro and in vivo and did not stimulate specific CENP-B binding to CENP-A nucleosomes in vitro. We therefore propose a novel mechanism of CENP-B regulation by Nap1.

Indexed as

AutoantigensCentromereCentromere Protein ACentromere Protein BChromosomal Proteins, Non-HistoneChromosomes, HumanDNA, SatelliteElectrophoretic Mobility Shift AssayHistonesHumansMicrotubule-Associated ProteinsNeoplasm ProteinsNuclear ProteinsNucleosomesProtein BindingProteinsAutoantigensCENPA protein, humanCentromere Protein ACentromere Protein BChromosomal Proteins, Non-Histonecytoplasmic linker protein 170DNA, SatelliteHistonesMicrotubule-Associated ProteinsNASP protein, humanNeoplasm ProteinsNuclear ProteinsNucleosomesProteinsTRMO protein, humantRNA Methyltransferases

Identifiers

PMID23325853
PMCPMC3597661
OpenAlexW2164195221

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.