Evidence map›Paper›PMID 23324459›Full record

ArticleNucleus (Austin, Tex.)

A single molecule view on Dbp5 and mRNA at the nuclear pore.

Tim Kaminski, Jan Peter Siebrasse, Ulrich Kubitscheck

Abstract read
In one paragraph

Article in Nucleus (Austin, Tex.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Gle1 is required for tRNA to stimulate Dbp5 ATPase activitybioRxiv : the preprint server for biology · 2023
    Article
  3. Evolution and diversification of the nuclear pore complex.Biochemical Society transactions · 2021
    Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tim KaminskiInstitute of Physical and Theoretical Chemistry, Rheinische Friedrich-Wilhelms-University Bonn, Bonn, Germany.
Jan Peter Siebrasse
Ulrich Kubitscheck

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous molecular details of intracellular mRNA processing have been revealed in recent years. However, the export process of single native mRNA molecules, the actual translocation through the nuclear pore complex (NPC), could not yet be examined in vivo. The problem is observing mRNA molecules without interfering with their native behavior. We used a protein-based labeling approach to visualize single native mRNPs in live salivary gland cells of Chironomus tentans, an iconic system used for decades to study the mRNA life cycle. Recombinant hrp36, the C. tentans homolog of mammalian hnRNP A1, was fluorescence labeled and microinjected into living cells, where it was integrated into nascent mRNPs. Intranuclear trajectories of single mRNPs, including their NPC passage, were observed with high space and time resolution employing a custom-built light sheet fluorescence microscope. We analyzed the kinetics and dynamics of mRNP export and started to study its mechanism and regulation by measuring the turnover-kinetics of single Dbp5 at the NPC.

Indexed as

Adenosine TriphosphateAnimalsBinding SitesChironomidaeHeterogeneous-Nuclear RibonucleoproteinsKineticsMicroscopy, FluorescenceNuclear PoreRibonucleoproteinsRNA, MessengerSalivary GlandsAdenosine TriphosphateHeterogeneous-Nuclear Ribonucleoproteinsmessenger ribonucleoproteinRibonucleoproteinsRNA, Messengercytoplasmic probingDbp5light sheet microscopemRNA-exportmRNA labellingnuclear pore complex nuclear retentionnuclear probingnucleocytoplasmic trafficking

Identifiers

PMID23324459
PMCPMC3585031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.