Evidence map›Paper›PMID 23324054›Full record

ArticleBiochemistry2013

Photoaffinity labeling of the sigma-1 receptor with N-[3-(4-nitrophenyl)propyl]-N-dodecylamine: evidence of receptor dimers.

Uyen B Chu, Subramaniam Ramachandran, Abdol R Hajipour, Arnold E Ruoho

Abstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Peeking into Sigma-1 Receptor Functions Through the Retina.Advances in experimental medicine and biology · 2017
    Review
  11. Article
  12. Article
  13. Sigma Receptor Binding Assays.Current protocols in pharmacology · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Uyen B ChuDepartment of Neuroscience, University of Wisconsin School of Medicine and Public Health, Madison, WI 53706, United States.
Subramaniam Ramachandran
Abdol R Hajipour
Arnold E Ruoho
University of Wisconsin–Madison · USIsfahan University of Technology · IR

Funding

STRUCTURE OF THE BETA-ADRENERGIC RECEPTOR-CYCLASE SYSTEMR01GM033138 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI RUOHO, ARNOLD EINO · 1985 to 2011
$3.1M
Sigma Receptor Structure/Function/K+ Channel ModulationR01MH065503 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI RUOHO, ARNOLD EINO · 2003 to 2007
$1.6M
NIGMS NIH HHS GM-33138NIGMS NIH HHS R01 GM033138NIMH NIH HHS MH065503NIMH NIH HHS R01 MH065503
6 · The paper itself

Abstract

The sigma-1 receptor is a ligand-regulated endoplasmic reticulum (ER) resident chaperone involved in the maintenance of cellular homeostasis. Coupling of the sigma-1 receptor with various ER and/or plasma membrane ion channels is associated with its ability to regulate the locomotor activity and cellular proliferation produced in response to sigma-1 receptor ligands. A number of endogenous small molecules bind to the sigma-1 receptor and have been shown to regulate its activity; these include progesterone, N,N-dimethyltryptamine, d-erythro-sphingosine, and/or other endogenous lipids. We previously reported the synthesis of long chain N-alkylamine derivatives and the characterization of the structure-activity relationship between the chain length of N-alkylamine and affinities at the sigma-1 receptor. Here, we present data demonstrating the photoincorporation of one of these N-alkylamine derivatives, N-[3-(4-nitrophenyl)propyl]-N-dodecylamine (4-NPPC12), to the sigma-1 receptor. Matrix-assisted laser desorption ionization time-of-flight and tandem mass spectrometry showed that 4-NPPC12 photoinserted at histidine 154 of the derivatized population of the sigma-1 receptor. Interestingly, light-dependent photoinsertion of 4-NPPC12 resulted in an enhanced electrophoretic mobility of only 50% of the derivatized receptor molecules as assessed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The proposed binding and reactivity of 4-NPPC12 evoke a ligand binding model for the sigma-1 receptor that likely involves a receptor dimer and/or oligomer.

Indexed as

Affinity LabelsAminesAnimalsBinding SitesChlorocebus aethiopsCOS CellsGene ExpressionGuinea PigsLightPhotochemical ProcessesProtein MultimerizationRatsReceptors, sigmaSigma-1 ReceptorAffinity LabelsAminesdodecylamineReceptors, sigmaSigma-1 Receptor

Identifiers

PMID23324054
PMCPMC3581363
OpenAlexW2094239787

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.