Evidence map›Paper›PMID 23322637›Full record

ArticlemBio2013

Cryptococcus neoformans Rim101 is associated with cell wall remodeling and evasion of the host immune responses.

Teresa R O'Meara, Stephanie M Holmer, Kyla Selvig, Fred Dietrich, J Andrew Alspaugh

Open access · goldAbstract read
In one paragraph

Article in mBio, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 134 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Meiosis-specific genes play roles in ploidy reduction inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Acetylation and accessibility ofCell surface (Amsterdam, Netherlands) · 2026
    Article
  6. Article
  7. Review
  8. Meiosis-specific genes play roles in ploidy reduction inbioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Is Cryptococcus neoformans a pleomorphic fungus?Current opinion in microbiology · 2024
    Review
  15. Review
  16. Article
  17. A trade-off between proliferation and defense in the fungal pathogenbioRxiv : the preprint server for biology · 2024
    Article
  18. Molecular Diagnostics ofDiseases (Basel, Switzerland) · 2024
    Review
  19. Article
  20. Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Teresa R O'MearaDepartment of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
Stephanie M Holmer
Kyla Selvig
Fred Dietrich
J Andrew Alspaugh
Duke University · US

Funding

ORGANIZATION AND FUNCTIONS OF CELLULAR STRUCTUREST32GM007184 · NIGMS · DUKE UNIVERSITY · PI JINKS-ROBERTSON, SUE · 1985 to 2019
$18.2M
Coordinated Regulation of Virulence Genes in C. neoformansR01AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW, WORMLEY, FLOYD L. · 2011 to 2020
$4.0M
Ras Signaling in C. neoformans virulence and developmentR01AI050128 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW · 2003 to 2012
$3.0M
Coordinated Regulation of Virulence Genes in C. neoformansR56AI074677 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, ANDREW · 2009 to 2010
$608k
Ras signaling in C.neoformans virulence and developmentR21AI050128 · NIAID · DUKE UNIVERSITY · PI ALSPAUGH, J. ANDREW · 2002 to 2002
$305k
NIAID NIH HHS AI050128NIAID NIH HHS AI074677NIAID NIH HHS R01 AI050128NIAID NIH HHS R01 AI074677NIAID NIH HHS R21 AI050128NIAID NIH HHS R56 AI074677NIGMS NIH HHS T32 GM007184
6 · The paper itself

Abstract

unlabelledInfectious microorganisms often play a role in modulating the immune responses of their infected hosts. We demonstrate that Cryptococcus neoformans signals through the Rim101 transcription factor to regulate cell wall composition and the host-pathogen interface. In the absence of Rim101, C. neoformans exhibits an altered cell surface in response to host signals, generating an excessive and ineffective immune response that results in accelerated host death. This host immune response to the rim101Δ mutant strain is characterized by increased neutrophil influx into the infected lungs and an altered pattern of host cytokine expression compared to the response to wild-type cryptococcal infection. To identify genes associated with the observed phenotypes, we performed whole-genome RNA sequencing experiments under capsule-inducing conditions. We defined the downstream regulon of the Rim101 transcription factor and determined potential cell wall processes involved in the capsule attachment defects and altered mechanisms of virulence in the rim101Δ mutant. The cell wall generates structural stability for the cell and allows the attachment of surface molecules such as capsule polysaccharides. In turn, the capsule provides an effective mask for the immunogenic cell wall, shielding it from recognition by the host immune system. IMPORTANCE: Cryptococcus neoformans is an opportunistic human pathogen that is a significant cause of death in immunocompromised individuals. There are two major causes of death due to this pathogen: meningitis due to uncontrolled fungal proliferation in the brain in the face of a weakened immune system and immune reconstitution inflammatory syndrome characterized by an overactive immune response to subclinical levels of the pathogen. In this study, we examined how C. neoformans uses the conserved Rim101 transcription factor to specifically remodel the host-pathogen interface, thus regulating the host immune response. These studies explored the complex ways in which successful microbial pathogens induce phenotypes that ensure their own survival while simultaneously controlling the nature and degree of the associated host response.

Indexed as

Gene Expression Regulation, FungalHost-Pathogen InteractionsImmune EvasionAnimalsCell WallCryptococcosisCryptococcus neoformansDisease Models, AnimalFemaleFungal ProteinsGene DeletionGene Expression ProfilingLungMiceMice, Inbred C57BLRegulonFungal ProteinsTranscription Factors

Identifiers

PMID23322637
PMCPMC3551547
OpenAlexW2126971894

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.