Evidence map›Paper›PMID 23322567›Full record

SynthesisInvestigative ophthalmology & visual science2013

Identification of a candidate gene for astigmatism.

Margarida C Lopes, Pirro G Hysi, Virginie J M Verhoeven, Stuart Macgregor, Alex W Hewitt, Grant W Montgomery, Phillippa Cumberland, Johannes R Vingerling, Terri L Young, Cornelia M van Duijn and 7 more

Open access · hybridAbstract readMeta-AnalysisTwin Study
In one paragraph

Synthesis in Investigative ophthalmology & visual science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 3 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 3 syntheses or guidelines pooled it, 38 citations in OpenAlex.

  1. Pooled it
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  4. Article
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  11. Article
  12. Refractive, corneal and ocular residual astigmatism: distribution in a German population and age-dependency - the Gutenberg health study.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2017
    Observational
  13. Article
  14. Article
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  16. On the analysis of a repeated measure design in genome-wide association analysis.International journal of environmental research and public health · 2014
    Article
  17. Article
  18. Astigmatism and myopia in Tohono O'odham Native American children.Optometry and vision science : official publication of the American Academy of Optometry · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 4 countries.

Margarida C LopesDepartment of Twin Research and Genetic Epidemiology, King's College London, St. Thomas' Hospital, London, United Kingdom.
Pirro G Hysi
Virginie J M Verhoeven
Stuart Macgregor
Alex W Hewitt
Grant W Montgomery
Phillippa Cumberland
Johannes R Vingerling
Terri L Young
Cornelia M van Duijn
Ben Oostra
Andre G Uitterlinden
Jugnoo S Rahi
David A Mackey
Caroline C W Klaver
Toby Andrew
Christopher J Hammond
Erasmus MC · NLKing's College London · GBMedical Research Council · GBOphthalmology Associates (United States) · USQIMR Berghofer Medical Research Institute · AUCenter for Human Genetics · USCentre for Eye Research Australia · AU

Funding

International Collaborative Twin Study of Refractive and Glaucoma EndophenotypesR01EY018246 · NEI · DUKE UNIVERSITY · PI YOUNG, TERRI LOIS · 2007 to 2009
$1.8M
Department of Health SRF/01/010NEI NIH HHS 1R01EY018246NEI NIH HHS R01 EY018246NEI NIH HHS R01 EY 018246-01Wellcome TrustWellcome Trust 083478
6 · The paper itself

Abstract

purposeAstigmatism is a common refractive error that reduces vision, where the curvature and refractive power of the cornea in one meridian are less than those of the perpendicular axis. It is a complex trait likely to be influenced by both genetic and environmental factors. Twin studies of astigmatism have found approximately 60% of phenotypic variance is explained by genetic factors. This study aimed to identify susceptibility loci for astigmatism.

methodsWe performed a meta-analysis of seven genome-wide association studies that included 22,100 individuals of European descent, where astigmatism was defined as the number of diopters of cylinder prescription, using fixed effect inverse variance-weighted methods.

resultsA susceptibility locus was identified with lead single nucleotide polymorphism rs3771395 on chromosome 2p13.3 (meta-analysis, P = 1.97 × 10(-7)) in the VAX2 gene. VAX2 plays an important role in the development of the dorsoventral axis of the eye. Animal studies have shown a gradient in astigmatism along the vertical plane, with corresponding changes in refraction, particularly in the ventral field.

conclusionsThis finding advances the understanding of refractive error, and provides new potential pathways to be evaluated with regard to the development of astigmatism.

Indexed as

Chromosomes, Human, Pair 2AdolescentAdultAgedAged, 80 and overAstigmatismAustraliaEnvironmentFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHomeodomain ProteinsHumansMaleMiddle AgedHomeodomain ProteinsVAX2 protein, human

Identifiers

PMID23322567
PMCPMC3576051
OpenAlexW2018844166

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.