Evidence map›Paper›PMID 23322550›Full record

ArticleSmall (Weinheim an der Bergstrasse, Germany)2013

Comparison of nanotube-protein corona composition in cell culture media.

Jonathan H Shannahan, Jared M Brown, Ran Chen, Pu Chun Ke, Xianyin Lai, Somenath Mitra, Frank A Witzmann

Open access · greenAbstract read
In one paragraph

Article in Small (Weinheim an der Bergstrasse, Germany), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 131 citations in OpenAlex.

  1. Review
  2. Article
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  6. Article
  7. Article
  8. Non-Modified Ultrasound-Responsive Gas Vesicles fromInternational journal of nanomedicine · 2021
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Experimental challenges regarding the in vitro investigation of the nanoparticle-biocorona in disease states.Toxicology in vitro : an international journal published in association with BIBRA · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Jonathan H ShannahanDepartment of Pharmacology and Toxicology, Brody School of Medicine, East Carolina University, Greenville, North Carolina 27834, USA.
Jared M Brown
Ran Chen
Pu Chun Ke
Xianyin Lai
Somenath Mitra
Frank A Witzmann
Clemson University · USEast Carolina University · USIndiana University – Purdue University Indianapolis · USIndiana University School of MedicineNew Jersey Institute of Technology · US

Funding

Mechanisms of non-IgE Mast Cell Activation by Environmental ParticulatesR01ES019311 · NIEHS · UNIVERSITY OF COLORADO DENVER · PI BROWN, JARED MICHAEL · 2010 to 2024
$7.0M
Synthesis and Characterization CoreU19ES019525 · NIEHS · RESEARCH TRIANGLE INSTITUTE · PI FENNELL, TIMOTHY RAYMOND · 2010 to 2014
$6.3M
Nanoparticle Effects on Epithelial Cell Protein Expression and FunctionR01GM085218 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI WITZMANN, FRANK A · 2008 to 2012
$2.1M
Characterization Methodologies & Proteomics to Assess Carbon Nanotube ExposureRC2ES018810 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI MITRA, SOMENATH, WITZMANN, FRANK A · 2009 to 2012
$1.5M
NIEHS NIH HHS R01 ES019311NIEHS NIH HHS RC2 ES018025NIEHS NIH HHS RC2 ES018810NIEHS NIH HHS U19 ES019525NIGMS NIH HHS R01 GM085218NIGMS NIH HHS R01GM085218
6 · The paper itself

Abstract

In biological environments, nanomaterials associate with proteins forming a protein corona (PC). The PC may alter the nanomaterial's pharmacokinetics and pharmacodynamics, thereby influencing toxicity. Using a label-free mass spectrometry-based proteomics approach, the composition of the PC is examined for a set of nanotubes (NTs) including unmodified and carboxylated single- (SWCNT) and multi-walled carbon nanotubes (MWCNT), polyvinylpyrrolidone (PVP)-coated MWCNT (MWCNT-PVP), and nanoclay. NTs are incubated for 1 h in simulated cell culture conditions, then washed, resuspended in PBS, and assessed by liquid chromatography-tandem mass spectrometry (LC-MS/MS) for their associated PC. To determine those attributes that influence PC formation, the NTs are extensively characterized. NTs had negative zeta potentials in water (SWCNT-COOH < MWCNT-COOH < unmodified NTs) while carboxylation increases their hydrodynamic sizes. All NTs are also found to associate a common subset of proteins including albumin, titin, and apolipoproteins. SWCNT-COOH and MWCNT-COOH are found to bind the greatest number of proteins (181 and 133 respectively) compared to unmodified NTs (<100), suggesting covalent binding to protein amines. Modified NTs bind a number of unique proteins compared to unmodified NTs, implying hydrogen bonding and electrostatic interactions are involved in PC formation. PVP-coating of MWCNT did not influence PC composition, further reinforcing the possibility of hydrogen bonding and electrostatic interactions. No relationships are found between PC composition and corresponding isoelectric point, hydropathy, or aliphatic index, implying minimal roles of hydrophobic interaction and pi-stacking.

Indexed as

Culture MediaMass SpectrometryNanotubes, CarbonPovidoneProteinsProteomicsCulture MediaNanotubes, CarbonPovidoneProteins

Identifiers

PMID23322550
PMCPMC3725593
OpenAlexW2143569918

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.