Evidence map›Paper›PMID 23322041›Full record

ArticleNature communications2013

Structural insights into protein-only RNase P complexed with tRNA.

Anthony Gobert, Franziska Pinker, Olivier Fuchsbauer, Bernard Gutmann, René Boutin, Pierre Roblin, Claude Sauter, Philippe Giegé

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. How RNases Shape Mitochondrial Transcriptomes.International journal of molecular sciences · 2022
    Review
  8. Article
  9. Review
  10. The many faces of RNA-based RNase P, an RNA-world relic.Trends in biochemical sciences · 2021
    Review
  11. The Dynamic Network of RNP RNase P Subunits.International journal of molecular sciences · 2021
    Review
  12. Structural basis of RNA processing by human mitochondrial RNase P.Nature structural & molecular biology · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Targeted cleavage ofCommunications biology · 2018
    Article
  20. Molecular recognition of pre-tRNA byRNA (New York, N.Y.) · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Anthony GobertInstitut de Biologie Moléculaire des Plantes du CNRS, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France.
Franziska Pinker
Olivier Fuchsbauer
Bernard Gutmann
René Boutin
Pierre Roblin
Claude Sauter
Philippe Giegé
Centre National de la Recherche Scientifique · FRArchitecture et Réactivité de l'arN · FRInstitut de Biologie Moléculaire des Plantes · FRInstitut de Biologie Moléculaire et Cellulaire · FRNantes Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNase P is the essential activity removing 5'-leader sequences from transfer RNA precursors. RNase P was always associated with ribonucleoprotein complexes before the discovery of protein-only RNase P enzymes called PRORPs (PROteinaceous RNase P) in eukaryotes. Here we provide biophysical and functional data to understand the mode of action of PRORP enzymes. Activity assays and footprinting experiments show that the anticodon domain of transfer RNA is dispensable, whereas individual residues in D and TψC loops are essential for PRORP function. PRORP proteins are characterized in solution and a molecular envelope is derived from small-angle X-ray scattering. Conserved residues are shown to be involved in the binding of one zinc atom to PRORP. These results facilitate the elaboration of a model of the PRORP/transfer RNA interaction. The comparison with the ribonucleoprotein RNase P/transfer RNA complex suggests that transfer RNA recognition by PRORP proteins is similar to that by ribonucleoprotein RNase P.

Indexed as

ArabidopsisArabidopsis ProteinsModels, BiologicalModels, MolecularProtein BindingRecombination, GeneticRegulatory Sequences, Ribonucleic AcidRibonuclease PRibonucleoproteinsRNARNA, MitochondrialRNA, PlantRNA PrecursorsRNA, TransferScattering, Small AngleSolutionsArabidopsis ProteinsPRORP1 protein, ArabidopsisPRORP2 protein, ArabidopsisRegulatory Sequences, Ribonucleic AcidRibonuclease PRibonucleoproteinsRNARNA, MitochondrialRNA, PlantRNA PrecursorsRNA, TransferSolutionsZinc

Identifiers

PMID23322041
PMCPMC3562450
OpenAlexW1995813154

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.