Evidence map›Paper›PMID 23319597›Full record

ArticleThe Journal of biological chemistry2013

An extracellular ion pathway plays a central role in the cooperative gating of a K(2P) K+ channel by extracellular pH.

Wendy González, Leandro Zúñiga, L Pablo Cid, Barbara Arévalo, María Isabel Niemeyer, Francisco V Sepúlveda

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. C-type inactivation and proton modulation mechanisms of the TASK3 channel.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Structural Basis for pH-gating of the KNature communications · 2022
    Article
  8. Article
  9. Review
  10. Review
  11. The Polysite Pharmacology of TREK KAdvances in experimental medicine and biology · 2021
    Article
  12. Polynuclear Ruthenium Amines Inhibit KCell chemical biology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wendy GonzálezCentro de Estudios Científicos (CECs), 5110466 Valdivia, Chile.
Leandro Zúñiga
L Pablo Cid
Barbara Arévalo
María Isabel Niemeyer
Francisco V Sepúlveda
Centro de Estudios Científicos · CLUniversity of Talca · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proton-gated TASK-3 K(+) channel belongs to the K(2P) family of proteins that underlie the K(+) leak setting the membrane potential in all cells. TASK-3 is under cooperative gating control by extracellular [H(+)]. Use of recently solved K(2P) structures allows us to explore the molecular mechanism of TASK-3 cooperative pH gating. Tunnel-like side portals define an extracellular ion pathway to the selectivity filter. We use a combination of molecular modeling and functional assays to show that pH-sensing histidine residues and K(+) ions mutually interact electrostatically in the confines of the extracellular ion pathway. K(+) ions modulate the pK(a) of sensing histidine side chains whose charge states in turn determine the open/closed transition of the channel pore. Cooperativity, and therefore steep dependence of TASK-3 K(+) channel activity on extracellular pH, is dependent on an effect of the permeant ion on the channel pH(o) sensors.

Indexed as

Ion Channel GatingAnimalsBinding SitesDose-Response Relationship, DrugElectrophysiologyGuinea PigsHumansHydrogen-Ion ConcentrationIonsMembrane PotentialsMiceModels, MolecularMolecular ConformationPatch-Clamp TechniquesPotassium Channels, Tandem Pore DomainProbabilityIonsKCNK9 protein, humanPotassium Channels, Tandem Pore DomainProtons

Identifiers

PMID23319597
PMCPMC3581391
OpenAlexW2069805384

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.