Evidence map›Paper›PMID 23316442›Full record

ArticleG3 (Bethesda, Md.)2013

Genetic analysis of recombinant inbred lines for Sorghum bicolor × Sorghum propinquum.

Wenqian Kong, Huizhe Jin, Cleve D Franks, Changsoo Kim, Rajib Bandopadhyay, Mukesh K Rana, Susan A Auckland, Valorie H Goff, Lisa K Rainville, Gloria B Burow and 3 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Quantitative trait mapping of plant architecture in two BCTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  5. Article
  6. Article
  7. Transmission Genetics of aFrontiers in plant science · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Genetic analysis of vegetative branching in sorghum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  17. Identification of bioconversion quantitative trait loci in the interspecific cross Sorghum bicolor × Sorghum propinquum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Wenqian KongPlant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602, USA.
Huizhe Jin
Cleve D Franks
Changsoo Kim
Rajib Bandopadhyay
Mukesh K Rana
Susan A Auckland
Valorie H Goff
Lisa K Rainville
Gloria B Burow
Charles Woodfin
John J Burke
Andrew H Paterson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a recombinant inbred line (RIL) population of 161 F5 genotypes for the widest euploid cross that can be made to cultivated sorghum (Sorghum bicolor) using conventional techniques, S. bicolor × Sorghum propinquum, that segregates for many traits related to plant architecture, growth and development, reproduction, and life history. The genetic map of the S. bicolor × S. propinquum RILs contains 141 loci on 10 linkage groups collectively spanning 773.1 cM. Although the genetic map has DNA marker density well-suited to quantitative trait loci mapping and samples most of the genome, our previous observations that sorghum pericentromeric heterochromatin is recalcitrant to recombination is highlighted by the finding that the vast majority of recombination in sorghum is concentrated in small regions of euchromatin that are distal to most chromosomes. The advancement of the RIL population in an environment to which the S. bicolor parent was well adapted (indeed bred for) but the S. propinquum parent was not largely eliminated an allele for short-day flowering that confounded many other traits, for example, permitting us to map new quantitative trait loci for flowering that previously eluded detection. Additional recombination that has accrued in the development of this RIL population also may have improved resolution of apices of heterozygote excess, accounting for their greater abundance in the F5 than the F2 generation. The S. bicolor × S. propinquum RIL population offers advantages over early-generation populations that will shed new light on genetic, environmental, and physiological/biochemical factors that regulate plant growth and development.

Indexed as

Chromosome MappingGenotypeHybridization, GeneticBreedingCrosses, GeneticMicrosatellite RepeatsQuantitative Trait LociRecombination, GeneticSorghumDNA markerquantitative trait locusrecombinationsegregation distortionsimple-sequence repeat

Identifiers

PMID23316442
PMCPMC3538335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.