ArticleInternational journal of plant genomics2012
SNP markers and their impact on plant breeding.
Article in International journal of plant genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 161 papers.
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Who cites it
161 citing papers in PubMed.
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- Genetic dissection of oil content in maize kernel using combined genome-wide association analysis and linkage mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Development and validation of KASP markers for powdery mildew resistance in Korean naked barley using QTL-seq.Molecular breeding : new strategies in plant improvement · 2026Article
- Genetic Variation in the Main Cultivar Collection ofCurrent issues in molecular biology · 2026Article
- Advances and prospects of genomic-assisted breeding in roots, tubers, and banana crops.Frontiers in plant science · 2026Review
- Growth-Rate Related Quantitative Trait Locus Analysis of Monokaryotic Isolates ofJournal of fungi (Basel, Switzerland) · 2025Article
- Genome-Wide Association Study Using High-Density SNP Chip Markers Revealed Novel Bacterial Panicle Blight (Burkholderia glumae) Resistance Genes in Rice.The plant pathology journal · 2025Article
- Evaluation of salinity tolerance of Egyptian barley genotypes and their dehydrin 6-based single nucleotide polymorphisms (SNPs) diversity.Journal, genetic engineering & biotechnology · 2025Article
- Geobotanical Study, DNA Barcoding, and Simple Sequence Repeat (SSR) Marker Analysis to Determine the Population Structure and Genetic Diversity of Rare and EndangeredPlants (Basel, Switzerland) · 2025Article
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- Discovery of variation in genes related to agronomic traits by sequencing the genome of Cucurbita pepo varieties.BMC genomics · 2025Article
- A comprehensive catalog of single nucleotide polymorphisms (SNPs) from the black pepper (Piper nigrum L.) genome.BMC genomics · 2025Article
- An initial exploration of core collection construction and DNA fingerprinting inFrontiers in plant science · 2025Article
- Genetic evolution of parental populations and construction of core germplasm populations in qinghai spruce seed orchard based on SLAF-seq technology.Frontiers in genetics · 2025Article
- Population genomics of Brazilian native fruit species ofFrontiers in plant science · 2025Article
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- Genetic diversity and structure of Persicaria amphibia (Polygonaceae) in South Korea using genotyping by sequencing.Genes & genomics · 2025Article
- Assessing genetic redundancy and diversity in Colombian cacao germplasm banks using SNP fingerprinting.Frontiers in plant science · 2025Article
- Genetic diversity and population structure analyses of tropical maize inbred lines using Single Nucleotide Polymorphism markers.PloS one · 2025Article
101 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The use of molecular markers has revolutionized the pace and precision of plant genetic analysis which in turn facilitated the implementation of molecular breeding of crops. The last three decades have seen tremendous advances in the evolution of marker systems and the respective detection platforms. Markers based on single nucleotide polymorphisms (SNPs) have rapidly gained the center stage of molecular genetics during the recent years due to their abundance in the genomes and their amenability for high-throughput detection formats and platforms. Computational approaches dominate SNP discovery methods due to the ever-increasing sequence information in public databases; however, complex genomes pose special challenges in the identification of informative SNPs warranting alternative strategies in those crops. Many genotyping platforms and chemistries have become available making the use of SNPs even more attractive and efficient. This paper provides a review of historical and current efforts in the development, validation, and application of SNP markers in QTL/gene discovery and plant breeding by discussing key experimental strategies and cases exemplifying their impact.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.