Evidence map›Paper›PMID 23316053›Full record

ReviewThe Journal of biological chemistry2013

Structure and dynamic regulation of Abl kinases.

Shoghag Panjarian, Roxana E Iacob, Shugui Chen, John R Engen, Thomas E Smithgall

Abstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Global hinge sites of proteins as target sites for drug binding.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
  15. Exploring the conformational landscape of protein kinases.Current opinion in structural biology · 2024
    Review
  16. Review
  17. Review
  18. Article
  19. Styrylquinazoline derivatives as ABL inhibitors selective for different DFG orientations.Journal of enzyme inhibition and medicinal chemistry · 2023
    Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shoghag PanjarianDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15219, USA.
Roxana E Iacob
Shugui Chen
John R Engen
Thomas E Smithgall

Funding

Protein conformational change upon membrane associationR01GM086507 · NIGMS · NORTHEASTERN UNIVERSITY · PI ENGEN, JOHN R · 2009 to 2012
$1.6M
Extending the applications of hydrogen exchange mass spectrometryR01GM101135 · NIGMS · NORTHEASTERN UNIVERSITY · PI ENGEN, JOHN R · 2012 to 2015
$1.2M
Src Family Tyrosine Kinases in Tumor Cell SignalingR01CA101828 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SMITHGALL, THOMAS EDWARD · 2004 to 2007
$937k
Allosteric Inhibitor Discovery Technology for Protein KinasesR21CA169962 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SMITHGALL, THOMAS E. · 2012 to 2013
$353k
NCI NIH HHS CA101828NCI NIH HHS CA169962NCI NIH HHS R01 CA101828NCI NIH HHS R21 CA169962NIGMS NIH HHS GM086507NIGMS NIH HHS GM101135NIGMS NIH HHS R01 GM086507NIGMS NIH HHS R01 GM101135
6 · The paper itself

Abstract

The c-abl proto-oncogene encodes a unique protein-tyrosine kinase (Abl) distinct from c-Src, c-Fes, and other cytoplasmic tyrosine kinases. In normal cells, Abl plays prominent roles in cellular responses to genotoxic stress as well as in the regulation of the actin cytoskeleton. Abl is also well known in the context of Bcr-Abl, the oncogenic fusion protein characteristic of chronic myelogenous leukemia. Selective inhibitors of Bcr-Abl, of which imatinib is the prototype, have had a tremendous impact on clinical outcomes in chronic myelogenous leukemia and revolutionized the field of targeted cancer therapy. In this minireview, we focus on the structural organization and dynamics of Abl kinases and how these features influence inhibitor sensitivity.

Indexed as

Gene Expression Regulation, EnzymologicGene Expression Regulation, NeoplasticBenzamidesFusion Proteins, bcr-ablGenes, ablHumansImatinib MesylateLeukemia, Myelogenous, Chronic, BCR-ABL PositiveModels, BiologicalModels, ChemicalMolecular ConformationMutationMyristic AcidPiperazinesProtein BindingProtein Structure, TertiaryBenzamidesFusion Proteins, bcr-ablImatinib MesylateMAS1 protein, humanMyristic AcidPiperazinesProto-Oncogene MasPyrimidines

Identifiers

PMID23316053
PMCPMC3581414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.