Evidence map›Paper›PMID 23316051›Full record

ArticleThe Journal of biological chemistry2013

Mutants resistant to LpxC inhibitors by rebalancing cellular homeostasis.

Daina Zeng, Jinshi Zhao, Hak Suk Chung, Ziqiang Guan, Christian R H Raetz, Pei Zhou

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 71 citations in OpenAlex.

  1. LPS in gram-negative bacterial growth and physiology: outside but fully integrated.Microbiology and molecular biology reviews : MMBR · 2026
    Review
  2. Review
  3. Article
  4. A two-component system signaling hub controls enterococcal membrane remodeling in response to daptomycin.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Biology of novel LpxC inhibitors forMicrobiology spectrum · 2026
    Article
  6. Article
  7. Review
  8. Article
  9. Construction and Characterization of an lpxM-DeficientInfection and drug resistance · 2025
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Analysis of the Plasmid-BasedMicrobiology spectrum · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Analysis of the Plasmid-BasedApplied and environmental microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Daina ZengDepartment of Biochemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Jinshi Zhao
Hak Suk Chung
Ziqiang Guan
Christian R H Raetz
Pei Zhou
Duke Medical Center · USDuke University Hospital · US

Funding

STEROL LIPIDSU54GM069338 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 2003 to 2013
$72.2M
BIOSYNTHESIS AND FUNCTION OF LIPOPOLYSACCHARIDESR01GM051310 · NIGMS · DUKE UNIVERSITY · PI ZHOU, PEI · 1994 to 2013
$8.1M
Structure and Mechanism of LpxC in Lipid A BiosynthesisR01AI055588 · NIAID · DUKE UNIVERSITY · PI ZHOU, PEI · 2003 to 2012
$3.0M
NIAID NIH HHS AI-055588NIAID NIH HHS R01 AI055588NIGMS NIH HHS GM-069338NIGMS NIH HHS GM-51310NIGMS NIH HHS R01 GM051310NIGMS NIH HHS U54 GM069338
6 · The paper itself

Abstract

LpxC, the deacetylase that catalyzes the second and committed step of lipid A biosynthesis in Escherichia coli, is an essential enzyme in virtually all gram-negative bacteria and is one of the most promising antibiotic targets for treatment of multidrug-resistant gram-negative infections. Despite the rapid development of LpxC-targeting antibiotics, the potential mechanisms of bacterial resistance to LpxC inhibitors remain poorly understood. Here, we report the isolation and biochemical characterization of spontaneously arising E. coli mutants that are over 200-fold more resistant to LpxC inhibitors than the wild-type strain. These mutants have two chromosomal point mutations that account for resistance additively and independently; one is in fabZ, a dehydratase in fatty acid biosynthesis; the other is in thrS, the Thr-tRNA ligase. For both enzymes, the isolated mutations result in reduced enzymatic activities in vitro. Unexpectedly, we observed a decreased level of LpxC in bacterial cells harboring fabZ mutations in the absence of LpxC inhibitors, suggesting that the biosyntheses of fatty acids and lipid A are tightly regulated to maintain a balance between phospholipids and lipid A. Additionally, we show that the mutation in thrS slows protein production and cellular growth, indicating that reduced protein biosynthesis can confer a suppressive effect on inhibition of membrane biosynthesis. Altogether, our studies reveal a previously unrecognized mechanism of antibiotic resistance by rebalancing cellular homeostasis.

Indexed as

MutationAmidohydrolasesChromatography, LiquidEscherichia coliFatty AcidsHomeostasisLipid ALipidsLipopolysaccharidesMass SpectrometryModels, ChemicalPhospholipidsPoint MutationRNAThreonine-tRNA LigaseAmidohydrolasesFatty AcidsLipid ALipidsLipopolysaccharidesPhospholipidsRNAThreonine-tRNA LigaseUDP-3-O-acyl-N-acetylglucosamine deacetylase

Identifiers

PMID23316051
PMCPMC3581379
OpenAlexW2127675971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.